RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EPC2Q52LR7 807 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TXNDC11Q6PKC3 985 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MYCBPAPQ8TBZ2 947 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CRNKL1Q9BZJ0 848 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KRT84Q9NSB2 600 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ADGRL3Q9HAR2 1447 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PHACTR2O75167 634 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NPR1P16066 1061 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 IL12RB1P42701 662 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CAP1Q01518 475 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SQLEQ14534 574 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TOMM20Q15388 145 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 C10orf76Q5T2E6 689 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RNF207Q6ZRF8 634 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KIAA0825Q8IV33 1275 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KIF2BQ8N4N8 673 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RARSP54136 660 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ERICH5Q6P6B1 374 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SAMD14Q8IZD0 417 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CAVIN3Q969G5 261 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 C8orf33Q9H7E9 229 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PKD2L2Q9NZM6 624 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DIS3Q9Y2L1 958 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PSMD4P55036 377 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RAD51Q06609 339 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ARMCX4Q5H9R4 360 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF569Q5MCW4 686 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NACA2Q9H009 215 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 VPS45Q9NRW7 570 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 B8ZZF3 427 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SESN2P58004 480 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SRP54P61011 504 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MPP3Q13368 585 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ANO4Q32M45 955 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NCCRP1Q6ZVX7 275 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 FAM9CQ8IZT9 166 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ABHD8Q96I13 439 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TMOD2Q9NZR1 351 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 EPRSP07814 1512 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM64A6NGJ6 449 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM64BA6NI03 449 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ASIC2Q16515 512 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 C4orf46Q504U0 113 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SAPCD2Q86UD0 394 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 HINFPQ9BQA5 517 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RYDENQ9NUL5 291 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 UNC13AQ9UPW8 1703 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 EEF2KO00418 725 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SMNDC1O75940 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TEX19Q8NA77 164 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CORO1BQ9BR76 489 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PSTPIP2Q9H939 334 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SORCS3Q9UPU3 1222 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PIK3C3Q8NEB9 887 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TP53INP1Q96A56 240 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF532Q9HCE3 1301 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 FARP2O94887 1054 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PLCL1Q15111 1095 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SAMD11Q96NU1 681 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DDX47Q9H0S4 455 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SLC39A1Q9NY26 324 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF510Q9Y2H8 683 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 HTR3EA5X5Y0 456 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ALADP13716 330 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PSMA2P25787 234 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ART3Q13508 389 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 R3HDM1Q15032 1099 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 B3GNT3Q9Y2A9 372 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 H0Y3Z8 333 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ABCB1P08183 1280 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DNM1Q05193 864 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PDAP1Q13442 181 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 POLNQ7Z5Q5 900 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 DENND6AQ8IWF6 608 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PNMA2Q9UL42 364 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 KDM6AO15550 1401 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CD97P48960 835 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 CBX3Q13185 183 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ANGPTL6Q8NI99 470 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PRDM5Q9NQX1 630 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 TCP11L1Q9NUJ3 509 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PADI4Q9UM07 663 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 RASA4BC9J798 803 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 RASA4O43374 803 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 PGM3O95394 542 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 EIF2B2P49770 351 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 GRK7Q8WTQ7 553 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 WDR35Q9P2L0 1181 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 EXOC6BQ9Y2D4 811 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 AP1G2O75843 785 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MXI1P50539 228 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MYO1EQ12965 1108 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 NUP93Q8N1F7 819 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 INTS2Q9H0H0 1204 aaKnown RBP4.01□□□□□ -1.77
SYNE2-202ENST00000344113 RABL2BQ9UNT1 228 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 KLHL20Q9Y2M5 609 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 MLH1P40692 756 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 ELMSAN1Q6PJG2 1045 aa4.01□□□□□ -1.77
SYNE2-202ENST00000344113 EFCAB5A4FU69 1503 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms