RNA–Protein interactions for RNA: ENST00000343876.6

CCDC141-201, Transcript of coiled-coil domain containing 141, humanhuman

TSL 1 (best)

Gene CCDC141, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-201ENST00000343876 PLS1Q14651 629 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 WHAMMP3Q1A5X7 153 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 SLC5A9Q2M3M2 681 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 HSP90AA4PQ58FG1 418 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 RNF187Q5TA31 235 aaPredicted RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 SMYD5Q6GMV2 418 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 FASTKD5Q7L8L6 764 aaKnown RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 EPSTI1Q96J88 318 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 EPAS1Q99814 870 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 BPIFA3Q9BQP9 254 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 IRX2Q9BZI1 471 aaPredicted RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 KANSL2Q9H9L4 492 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 JMJD4Q9H9V9 463 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 CABP5Q9NP86 173 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 CPA4Q9UI42 421 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 ATP8A1Q9Y2Q0 1164 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 TMX2Q9Y320 296 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 PTPDC1A2A3K4 754 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L15C9J2P7 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L13C9JLJ4 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L11C9JVI0 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L18D6R9N7 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L22D6RA61 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L17D6RBQ6 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L19D6RCP7 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L20D6RJB6 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 F8VZ95 297 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 CBFA2T2O43439 604 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 ASNSP08243 561 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L24Q0WX57 530 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 NCAPHQ15003 741 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 UBE2SQ16763 222 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 ARMCX5Q6P1M9 558 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 USP17L6PQ6QN14 398 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 RASSF8Q8NHQ8 419 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 ABTB1Q969K4 478 aaPredicted RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 DDX27Q96GQ7 796 aaKnown RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 TMEM106CQ9BVX2 250 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 PORCNQ9H237 461 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 RNF41Q9H4P4 317 aaPredicted RBP5.28□□□□□ -1.56
CCDC141-201ENST00000343876 SSX2IPQ9Y2D8 614 aa5.28□□□□□ -1.56
CCDC141-201ENST00000343876 EBAG9O00559 213 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 OPLAHO14841 1288 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SUPT3HO75486 399 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 FLOT1O75955 427 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SLC3A2P08195 630 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 CDC25CP30307 473 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 TRPC1P48995 793 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 BIRC3Q13489 604 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PTPN14Q15678 1187 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SH3D19Q5HYK7 790 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 CEP128Q6ZU80 1094 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SAMD3Q8N6K7 520 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 ANKRD13CQ8N6S4 541 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SLAIN1Q8ND83 568 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 FAM76AQ8TAV0 307 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PXYLP1Q8TE99 480 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 RYDENQ9NUL5 291 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 DNAAF2Q9NVR5 837 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PRR12Q9ULL5 1215 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 COL6A3P12111 3177 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 ZMYM6O95789 1325 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 COL11A1P12107 1806 aaPredicted RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 A0A1W2PPC1 479 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 GOLGA6L9A6NEM1 432 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 EDIL3O43854 480 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 RTN3O95197 1032 aaPredicted RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 HNRNPCP07910 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 MSL3P1P0C860 447 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PNMA6AP0CW24 399 aaPredicted RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 TOP1P11387 765 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 CLCN6P51797 869 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 TSPY1Q01534 308 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 ZNF543Q08ER8 600 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 GRIK3Q13003 919 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 CUL3Q13618 768 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 RTN1Q16799 776 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SLC9C1Q4G0N8 1177 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 FAM9CQ8IZT9 166 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 NR1H4Q96RI1 486 aaPredicted RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SDF4Q9BRK5 362 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 NAT10Q9H0A0 1025 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 EPC1Q9H2F5 836 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 CNNM2Q9H8M5 875 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 TMEM98Q9Y2Y6 226 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SYNRGQ9UMZ2 1314 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 SPTBN5Q9NRC6 3674 aaKnown RBP5.27□□□□□ -1.57
CCDC141-201ENST00000343876 RLFQ13129 1914 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 A0A1W2PQ27 194 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 A0A1W2PQ64 194 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 A0A1W2PQD8 194 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 ERICH2A1L162 156 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PDHXO00330 501 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 NFIBO00712 420 aa5.27□□□□□ -1.57
CCDC141-201ENST00000343876 PGK2P07205 417 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms