RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 TRIM4Q9C037 500 aa9.05□□□□□ -0.96
PRDM2-203ENST00000343137 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
PRDM2-203ENST00000343137 SPATS2LQ9NUQ6 558 aaKnown RBP9.05□□□□□ -0.96
PRDM2-203ENST00000343137 SCOCQ9UIL1 159 aa9.05□□□□□ -0.96
PRDM2-203ENST00000343137 SALL3Q9BXA9 1300 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 MAP3K7O43318 606 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 CALB1P05937 261 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PLS3P13797 630 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 ANTXR2P58335 489 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 TAF11Q15544 211 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 ANKRD40Q6AI12 368 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 NXNQ6DKJ4 435 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SCYL3Q8IZE3 742 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SPICE1Q8N0Z3 855 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 KCTD6Q8NC69 237 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PYROXD1Q8WU10 500 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 FEM1BQ9UK73 627 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PPP1R9AQ9ULJ8 1098 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 MYO3BQ8WXR4 1341 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 KRT3P12035 628 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 GUCY1A2P33402 732 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 ARL4CP56559 192 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 NUGGCQ68CJ6 796 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 CEP95Q96GE4 821 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 FUCA2Q9BTY2 467 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PITPNM3Q9BZ71 974 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 TUFT1Q9NNX1 390 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 CNOT8Q9UFF9 292 aaKnown RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 GINS2Q9Y248 185 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 E9PMD0 336 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SFNP31947 248 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SERPINB6P35237 376 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SOX5P35711 763 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 RPAINQ86UA6 219 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SRRM1Q8IYB3 904 aaKnown RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 STRIP2Q9ULQ0 834 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SNX24Q9Y343 169 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 ZNF189O75820 626 aaPredicted RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 TBXAS1P24557 533 aaPredicted RBP9.04□□□□□ -0.96
PRDM2-203ENST00000343137 ARL4AP40617 200 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 SESN3P58005 492 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 UBXN2AP68543 259 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 HAUS8Q9BT25 410 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
PRDM2-203ENST00000343137 PRPSAP2O60256 369 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 CA4P22748 312 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 MAGOHP61326 146 aaKnown RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 KRT76Q01546 638 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 E2F5Q15329 346 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 SLC18A3Q16572 532 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 NME8Q8N427 588 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 PROCA1Q8NCQ7 364 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ELAC2Q9BQ52 826 aaKnown RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 TRPC5Q9UL62 973 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 UBE4BO95155 1302 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 TBX3O15119 743 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 MTF1Q14872 753 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 PSMD6Q15008 389 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 AP1ARQ63HQ0 302 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 CCNI2Q6ZMN8 369 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 SERPINI1Q99574 410 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 NMT2O60551 498 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 KRT37O76014 449 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 VAMP7P51809 220 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ZNF564Q8TBZ8 553 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 CHMP6Q96FZ7 201 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 LRGUKQ96M69 825 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 SEPT10Q9P0V9 454 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ANAPC7Q9UJX3 599 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 POTEB3A0JP26 581 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 PALM3A6NDB9 673 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 POTECB2RU33 542 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 EYA4O95677 639 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ECE1P42892 770 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 BASP1P80723 227 aaKnown RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 GABPAQ06546 454 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 DRAP1Q14919 205 aaPredicted RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 RBBP5Q15291 538 aaKnown RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 AGBL2Q5U5Z8 902 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 RASIP1Q5U651 963 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 POTEBQ6S5H4 581 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ERICH1Q86X53 443 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 NSUN4Q96CB9 384 aaKnown RBP9.03□□□□□ -0.96
PRDM2-203ENST00000343137 EFHD1Q9BUP0 239 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 ATP6V0A4Q9HBG4 840 aa9.03□□□□□ -0.96
PRDM2-203ENST00000343137 DIP2BQ9P265 1576 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms