RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RPAP3Q9H6T3 665 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 ELP3Q9H9T3 547 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 FAN1Q9Y2M0 1017 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 TOM1L1O75674 476 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 SUN1O94901 812 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 PAMP19021 973 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 CDC25BP30305 580 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 NECTIN1Q15223 517 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 SLC13A4Q9UKG4 626 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 GSTA4O15217 222 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 TAF1CQ15572 869 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 TRIM67Q6ZTA4 783 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 RHOT2Q8IXI1 618 aa16.1■□□□□ 0.17
UBE3B-202ENST00000342494 KLHL8Q9P2G9 620 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-202ENST00000342494 TEX2Q8IWB9 1127 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 RNF14Q9UBS8 474 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 CPB1P15086 417 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 GCLMP48507 274 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 GABPB1Q06547 395 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-202ENST00000342494 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
UBE3B-202ENST00000342494 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 TMEM270Q6UE05 265 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 MICALL2Q8IY33 904 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 ACRBPQ8NEB7 543 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 ZNRF3Q9ULT6 936 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-202ENST00000342494 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 EXT2Q93063 718 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 E9PMD0 336 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 CDR2Q01850 454 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 BCAS4Q8TDM0 211 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 N4BP2L2Q92802 583 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-202ENST00000342494 IFT43Q96FT9 208 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 ADAMTS1Q9UHI8 967 aa16.09■□□□□ 0.17
UBE3B-202ENST00000342494 NR3C1P04150 777 aa16.08■□□□□ 0.17
UBE3B-202ENST00000342494 EPHB4P54760 987 aa16.08■□□□□ 0.17
UBE3B-202ENST00000342494 RESTQ13127 1097 aa16.08■□□□□ 0.17
UBE3B-202ENST00000342494 FSD1LQ9BXM9 530 aa16.08■□□□□ 0.17
UBE3B-202ENST00000342494 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.17
UBE3B-202ENST00000342494 POLR3FQ9H1D9 316 aaPredicted RBP16.08■□□□□ 0.17
UBE3B-202ENST00000342494 MTIF3Q9H2K0 278 aaKnown RBP16.08■□□□□ 0.17
UBE3B-202ENST00000342494 ASNSD1Q9NWL6 643 aa16.08■□□□□ 0.17
UBE3B-202ENST00000342494 SESN3P58005 492 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 PSMC5P62195 406 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 R3HDM1Q15032 1099 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 FAF2Q96CS3 445 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 STRIP2Q9ULQ0 834 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 SYNMO15061 1565 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 TJP3O95049 919 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 DHX9Q08211 1270 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 KLC2Q9H0B6 622 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 IPO5O00410 1097 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 GRIN3BO60391 1043 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 GRM4Q14833 912 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 SLMAPQ14BN4 828 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 PYROXD1Q8WU10 500 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 EPS15L1Q9UBC2 864 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 TBK1Q9UHD2 729 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 ARHGAP31Q2M1Z3 1444 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 HECW2Q9P2P5 1572 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 PAPOLAP51003 745 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 PASD1Q8IV76 773 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 TRMT2AQ8IZ69 625 aaKnown RBP16.08■□□□□ 0.16
UBE3B-202ENST00000342494 ACAP3Q96P50 834 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 GINM1Q9NU53 330 aa16.08■□□□□ 0.16
UBE3B-202ENST00000342494 JCADQ9P266 1359 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 LARGE1O95461 756 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 YWHAHQ04917 246 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 ZKSCAN8Q15776 578 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 SLFNL1Q499Z3 407 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 CENPUQ71F23 418 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 PPWD1Q96BP3 646 aaKnown RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 DDX27Q96GQ7 796 aaKnown RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 UBE4BO95155 1302 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 TTC37Q6PGP7 1564 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 CUL4AQ13619 759 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 TFDP2Q14188 446 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 HP1BP3Q5SSJ5 553 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 RABGGTAQ92696 567 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 RAD54LQ92698 747 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 CNOT8Q9UFF9 292 aaKnown RBP16.07■□□□□ 0.16
UBE3B-202ENST00000342494 ANAPC7Q9UJX3 599 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 SOWAHDA6NJG2 315 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 C2orf54Q08AI8 447 aa16.07■□□□□ 0.16
UBE3B-202ENST00000342494 FRA10AC1Q70Z53 315 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms