RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 DDAH1O94760 285 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 PLEKHA8P1O95397 391 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 PPM1AP35813 382 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 PBX3P40426 434 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 MTHFRP42898 656 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 PTH1RQ03431 593 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 KRT17Q04695 432 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 ITGB3BPQ13352 177 aaPredicted RBP19.29■□□□□ 0.68
TRA2B-202ENST00000342294 ZNF558Q96NG5 402 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 SPG21Q9NZD8 308 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 LIMD1Q9UGP4 676 aa19.29■□□□□ 0.68
TRA2B-202ENST00000342294 ZBTB42B2RXF5 422 aa19.28■□□□□ 0.68
TRA2B-202ENST00000342294 CLASP2O75122 1294 aaKnown RBP19.28■□□□□ 0.68
TRA2B-202ENST00000342294 ARP10275 920 aa19.28■□□□□ 0.68
TRA2B-202ENST00000342294 CRYBB1P53674 252 aaPredicted RBP19.28■□□□□ 0.68
TRA2B-202ENST00000342294 CWF19L1Q69YN2 538 aaKnown RBP19.28■□□□□ 0.68
TRA2B-202ENST00000342294 MB21D2Q8IYB1 491 aaPredicted RBP19.28■□□□□ 0.68
TRA2B-202ENST00000342294 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
TRA2B-202ENST00000342294 USTQ9Y2C2 406 aa19.28■□□□□ 0.68
TRA2B-202ENST00000342294 COL1A2P08123 1366 aa19.28■□□□□ 0.68
TRA2B-202ENST00000342294 VPS13AQ96RL7 3174 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 HOXA2O43364 376 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 GPR32O75388 356 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 CCNE2O96020 404 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 WEE2P0C1S8 567 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 GNAQP50148 359 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 SMC1AQ14683 1233 aaKnown RBP19.27■□□□□ 0.68
TRA2B-202ENST00000342294 KIZQ2M2Z5 673 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 ABHD15Q6UXT9 468 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 CMTR1Q8N1G2 835 aaKnown RBP19.27■□□□□ 0.68
TRA2B-202ENST00000342294 SLC39A11Q8N1S5 342 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 LRRC43Q8N309 656 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 PLCD3Q8N3E9 789 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 TDRD5Q8NAT2 981 aaKnown RBP19.27■□□□□ 0.68
TRA2B-202ENST00000342294 OSMRQ99650 979 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 MFSD1Q9H3U5 465 aa19.27■□□□□ 0.68
TRA2B-202ENST00000342294 AGO4Q9HCK5 861 aaKnown RBP19.27■□□□□ 0.68
TRA2B-202ENST00000342294 NPR3P17342 541 aa19.26■□□□□ 0.67
TRA2B-202ENST00000342294 ZNF484Q5JVG2 852 aa19.26■□□□□ 0.67
TRA2B-202ENST00000342294 KIAA1841Q6NSI8 718 aa19.26■□□□□ 0.67
TRA2B-202ENST00000342294 PI15O43692 258 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 C22orf31O95567 290 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 AOC1P19801 751 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 ATP4AP20648 1035 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 CEP55Q53EZ4 464 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 RARS2Q5T160 578 aaKnown RBP19.25■□□□□ 0.67
TRA2B-202ENST00000342294 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 CCDC60Q8IWA6 550 aaPredicted RBP19.25■□□□□ 0.67
TRA2B-202ENST00000342294 C12orf76Q8N812 135 aaPredicted RBP19.25■□□□□ 0.67
TRA2B-202ENST00000342294 PPP1R16BQ96T49 567 aa19.25■□□□□ 0.67
TRA2B-202ENST00000342294 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
TRA2B-202ENST00000342294 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 MEIS1O00470 390 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 EOMESO95936 686 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 IGHDP01880 384 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 CLLU1OSQ5K130 101 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 ATAT1Q5SQI0 421 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 FAM160B1Q5W0V3 765 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 ECHDC2Q86YB7 292 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 CCDC105Q8IYK2 499 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 MTA3Q9BTC8 594 aa19.24■□□□□ 0.67
TRA2B-202ENST00000342294 EP300Q09472 2414 aaPredicted RBP19.23■□□□□ 0.67
TRA2B-202ENST00000342294 ZNF292O60281 2723 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 BACH1O14867 736 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 VTNP04004 478 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 ANGPT1Q15389 498 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 FLCNQ8NFG4 579 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 CYP26B1Q9NR63 512 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 DZANK1Q9NVP4 752 aa19.23■□□□□ 0.67
TRA2B-202ENST00000342294 DBR1Q9UK59 544 aaKnown RBP19.23■□□□□ 0.67
TRA2B-202ENST00000342294 CXCL14O95715 111 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 AAMPQ13685 434 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 PDXDC2PQ6P474 469 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
TRA2B-202ENST00000342294 ABI1Q8IZP0 508 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 DTWD2Q8NBA8 298 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 FEZF2Q8TBJ5 459 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 SLC22A17Q8WUG5 538 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 ADAMTS10Q9H324 1103 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 ZNF302Q9NR11 478 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 IRAK3Q9Y616 596 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 DMDP11532 3685 aa19.22■□□□□ 0.67
TRA2B-202ENST00000342294 DHX15O43143 795 aaKnown RBP19.21■□□□□ 0.67
TRA2B-202ENST00000342294 EPCAMP16422 314 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 RXRAP19793 462 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 SWSAP1Q6NVH7 229 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 TMTC2Q8N394 836 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 PGBD1Q96JS3 809 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 RTP3Q9BQQ7 232 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 ZBP1Q9H171 429 aa19.21■□□□□ 0.67
TRA2B-202ENST00000342294 A0A0U1RQF3 1178 aa19.2■□□□□ 0.66
TRA2B-202ENST00000342294 MED19A0JLT2 244 aaPredicted RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 DDX39AO00148 427 aaKnown RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 SH2B2O14492 632 aaPredicted RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 FOSP01100 380 aaPredicted RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 ZSCAN20P17040 1043 aaPredicted RBP19.2■□□□□ 0.66
TRA2B-202ENST00000342294 BCAR1P56945 870 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms