RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PCCAP05165 728 aaPredicted RBP20.02■□□□□ 0.8
SMPD1-201ENST00000342245 CACNA2D1P54289 1103 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 PTENP60484 403 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 CATIPQ7Z7H3 387 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 LONP2Q86WA8 852 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 FAM13CQ8NE31 585 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 MKL1Q969V6 931 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 AK8Q96MA6 479 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 MIS12Q9H081 205 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 SEMA6BQ9H3T3 888 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 DAAM1Q9Y4D1 1078 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 BZW2Q9Y6E2 419 aaKnown RBP20.02■□□□□ 0.8
SMPD1-201ENST00000342245 TLR2O60603 784 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 SCNN1BP51168 640 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 ASIC1P78348 528 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 KLRC3Q07444 240 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 KLHL30Q0D2K2 578 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 SLC29A2Q14542 456 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 CHADLQ6NUI6 762 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF365Q70YC5 407 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 PEX26Q7Z412 305 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 SLFN11Q7Z7L1 901 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 EEF2KMTQ96G04 330 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 IWS1Q96ST2 819 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 DDX23Q9BUQ8 820 aaKnown RBP20.02■□□□□ 0.8
SMPD1-201ENST00000342245 NLRC4Q9NPP4 1024 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF510Q9Y2H8 683 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 COMMD3-BMI1R4GMX3 469 aa20.02■□□□□ 0.8
SMPD1-201ENST00000342245 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.79
SMPD1-201ENST00000342245 A0A087X0T9 212 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 HNRNPCL1O60812 293 aaKnown RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 ECEL1O95672 775 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 FAM228BP0C875 321 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 DR1Q01658 176 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 SEC23AQ15436 765 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 PI16Q6UXB8 463 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 STKLD1Q8NE28 680 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 PPP1R14BQ96C90 147 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 GALNT8Q9NY28 637 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 MYH4Q9Y623 1939 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 A0A0A6YYK5 440 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 KCNA3P22001 575 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 NPEPPSP55786 919 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 ASIC2Q16515 512 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 DAAM2Q86T65 1068 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 LRRC8CQ8TDW0 803 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 NR1H4Q96RI1 486 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 PIH1D3Q9NQM4 214 aaKnown RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 TACC3Q9Y6A5 838 aa20.01■□□□□ 0.79
SMPD1-201ENST00000342245 ZNF142P52746 1687 aaPredicted RBP20.01■□□□□ 0.79
SMPD1-201ENST00000342245 CASZ1Q86V15 1759 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 VSIG1Q86XK7 387 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 PROM2Q8N271 834 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 ESR2Q92731 530 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 TSG101Q99816 390 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 NMRK1Q9NWW6 199 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 TJP3O95049 919 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 CCDC166P0CW27 439 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 ITGA4P13612 1032 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 AUHQ13825 339 aaKnown RBP20■□□□□ 0.79
SMPD1-201ENST00000342245 RCN2Q14257 317 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 MTFR1Q15390 333 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 GUF1Q8N442 669 aaKnown RBP20■□□□□ 0.79
SMPD1-201ENST00000342245 CCDC113Q9H0I3 377 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 STXBP5LQ9Y2K9 1186 aa20■□□□□ 0.79
SMPD1-201ENST00000342245 SIGLEC16A6NMB1 481 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TRAFD1O14545 582 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-201ENST00000342245 CETN3O15182 167 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 UQCRFS1P1P0C7P4 283 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TATP17735 454 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-201ENST00000342245 ALDH1B1P30837 517 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 KCNMA1Q12791 1236 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TTC5Q8N0Z6 440 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TPCN2Q8NHX9 752 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-201ENST00000342245 RMDN2Q96LZ7 410 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 MAGEB18Q96M61 343 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 CELF4Q9BZC1 486 aaKnown RBP19.99■□□□□ 0.79
SMPD1-201ENST00000342245 IL1RAPL1Q9NZN1 696 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TNKSO95271 1327 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 CCDC6Q16204 474 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 EXOC3L1Q86VI1 746 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 SLC17A8Q8NDX2 589 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 PHC3Q8NDX5 983 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 GATA6Q92908 595 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 CCDC87Q9NVE4 849 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 ADAMTS1Q9UHI8 967 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 PITPNM2Q9BZ72 1349 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 RGPD5Q99666 1765 aa19.99■□□□□ 0.79
SMPD1-201ENST00000342245 DCTN3O75935 186 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms