RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CD209Q9NNX6 404 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CHD4Q14839 1912 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CLTAP09496 248 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 IFNAR2P48551 515 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 LACTBP83111 547 aaPredicted RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 RPAINQ86UA6 219 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 GLIS3Q8NEA6 775 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CCDC17Q96LX7 622 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 BHMT2Q9H2M3 363 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP40Q9NVE5 1235 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CYP11B2P19099 503 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 ITGB3BPQ13352 177 aaPredicted RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 DALRD3Q5D0E6 543 aaKnown RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 ZNF571Q7Z3V5 609 aaPredicted RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 FAM178BQ8IXR5 827 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 SCFD1Q8WVM8 642 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 GPR101Q96P66 508 aaPredicted RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 NKIRAS1Q9NYS0 192 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 SNX24Q9Y343 169 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 COL18A1P39060 1754 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CASZ1Q86V15 1759 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 BACH1O14867 736 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 CHMP2AO43633 222 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 RPS6KA4O75676 772 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 PMS2P54278 862 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 GALCP54803 685 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 SLMAPQ14BN4 828 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 TPH2Q8IWU9 490 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 RHOT2Q8IXI1 618 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 TCP11Q8WWU5 503 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 N4BP2L2Q92802 583 aaPredicted RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 XPO6Q96QU8 1125 aaKnown RBP10.22□□□□□ -0.77
TRERF1-201ENST00000340840 PLCD4Q9BRC7 762 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 ASIC3Q9UHC3 531 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 DNAJC12Q9UKB3 198 aa10.22□□□□□ -0.77
TRERF1-201ENST00000340840 PASKQ96RG2 1323 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 GPR75-ASB3A0A0A6YYF3 556 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 MIF4GDA9UHW6 222 aaKnown RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 USP17L10C9JJH3 530 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 TLR2O60603 784 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 ZNF844Q08AG5 666 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 DHX34Q14147 1143 aaKnown RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 SEPT7Q16181 437 aaKnown RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 ASTE1Q2TB18 679 aaPredicted RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 USH1GQ495M9 461 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 SLFN13Q68D06 897 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 GLYCTKQ8IVS8 523 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 PROCA1Q8NCQ7 364 aaPredicted RBP10.21□□□□□ -0.77
TRERF1-201ENST00000340840 VTI1AQ96AJ9 217 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 MTFR1LQ9H019 292 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 SYNGAP1Q96PV0 1343 aa10.21□□□□□ -0.77
TRERF1-201ENST00000340840 PODXLO00592 558 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 AKR1B1P15121 316 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 STAT3P40763 770 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 MYL7Q01449 175 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 PLS1Q14651 629 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 FBXO11Q86XK2 927 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 KAT2BQ92831 832 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 DNAJC19Q96DA6 116 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 TRIM7Q9C029 511 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 TMOD2Q9NZR1 351 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 MYH10P35580 1976 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 A0A1W2PRG0 241 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 FAM170AA1A519 330 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 ARHGEF35A5YM69 484 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 BTNL10A8MVZ5 291 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 PHF20L1A8MW92 1017 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 RASGRF2O14827 1237 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 SUN1O94901 812 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 SSR1P43307 286 aaKnown RBP10.21□□□□□ -0.78
TRERF1-201ENST00000340840 ARHGAP4P98171 946 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 RAPGEF5Q92565 580 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 TRIM51Q9BSJ1 452 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 CELF4Q9BZC1 486 aaKnown RBP10.21□□□□□ -0.78
TRERF1-201ENST00000340840 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 HAUS2Q9NVX0 235 aa10.21□□□□□ -0.78
TRERF1-201ENST00000340840 A0A0A6YYK5 440 aaPredicted RBP10.2□□□□□ -0.78
TRERF1-201ENST00000340840 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 PON1P27169 355 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 SOX5P35711 763 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 GRIPAP1Q4V328 841 aa10.2□□□□□ -0.78
TRERF1-201ENST00000340840 RDH13Q8NBN7 331 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms