RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 WRAP73Q9P2S5 460 aaPredicted RBP17.3■□□□□ 0.36
VAPA-201ENST00000340541 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
VAPA-201ENST00000340541 KDM3AQ9Y4C1 1321 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 BAG4O95429 457 aaKnown RBP17.29■□□□□ 0.36
VAPA-201ENST00000340541 GHRP10912 638 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 COL9A1P20849 921 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 MCM7P33993 719 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 TOB1P50616 345 aaPredicted RBP17.29■□□□□ 0.36
VAPA-201ENST00000340541 KCNQ1P51787 676 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 PSMC5P62195 406 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 EPHA7Q15375 998 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
VAPA-201ENST00000340541 NME8Q8N427 588 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
VAPA-201ENST00000340541 APBB2Q92870 758 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 C1QTNF1Q9BXJ1 281 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 NIFKQ9BYG3 293 aaKnown RBP17.29■□□□□ 0.36
VAPA-201ENST00000340541 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
VAPA-201ENST00000340541 MARCH6O60337 910 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 QARSP47897 775 aaKnown RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 IER5Q5VY09 327 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 NCAPH2Q6IBW4 605 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.362e-8■■■□□ 15.2
VAPA-201ENST00000340541 ANO5Q75V66 913 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 TOP1MTQ969P6 601 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 IFIH1Q9BYX4 1025 aaKnown RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 PCDHA12Q9UN75 941 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
VAPA-201ENST00000340541 TCF20Q9UGU0 1960 aaKnown RBP17.28■□□□□ 0.36
VAPA-201ENST00000340541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.27■□□□□ 0.36
VAPA-201ENST00000340541 MAGEB2O15479 319 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 P4HBP07237 508 aaKnown RBP17.27■□□□□ 0.36
VAPA-201ENST00000340541 TXKP42681 527 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 NBR1Q14596 966 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 ZNF174Q15697 407 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 SPRED2Q7Z698 418 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 C4orf32Q8N8J7 132 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 SH2D3AQ9BRG2 576 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 RGL1Q9NZL6 768 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 SEPT9Q9UHD8 586 aaPredicted RBP17.27■□□□□ 0.36
VAPA-201ENST00000340541 SQORQ9Y6N5 450 aa17.27■□□□□ 0.36
VAPA-201ENST00000340541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
VAPA-201ENST00000340541 CLCN3P51790 818 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
VAPA-201ENST00000340541 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 TSHZ1Q6ZSZ6 1077 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 MYOCDQ8IZQ8 938 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 METTL13Q8N6R0 699 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 DYDC2Q96IM9 177 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 HSD17B14Q9BPX1 270 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 LXNQ9BS40 222 aa17.26■□□□□ 0.35
VAPA-201ENST00000340541 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 POTEMA6NI47 508 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 DDX11L8A8MPP1 907 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 GPR32O75388 356 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 SLITRK3O94933 977 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 VTNP04004 478 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 OR52Z1P0C646 297 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 CD52P31358 61 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 CTTNQ14247 550 aaKnown RBP17.25■□□□□ 0.35
VAPA-201ENST00000340541 PTPROQ16827 1216 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 FAM117BQ6P1L5 589 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 C4orf19Q8IY42 314 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 ZNF579Q8NAF0 562 aaKnown RBP17.25■□□□□ 0.35
VAPA-201ENST00000340541 TMEM40Q8WWA1 233 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 NECAB3Q96P71 396 aaPredicted RBP17.25■□□□□ 0.35
VAPA-201ENST00000340541 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
VAPA-201ENST00000340541 NOL7Q9UMY1 257 aaKnown RBP17.25■□□□□ 0.35
VAPA-201ENST00000340541 PCDHB6Q9Y5E3 794 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 ARID2Q68CP9 1835 aa17.25■□□□□ 0.35
VAPA-201ENST00000340541 M0QZ92 97 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 DRP2Q13474 957 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 LINC01599Q8WXQ3 324 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
VAPA-201ENST00000340541 YME1L1Q96TA2 773 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 CYP26B1Q9NR63 512 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
VAPA-201ENST00000340541 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
VAPA-201ENST00000340541 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
VAPA-201ENST00000340541 H3BNC9 293 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms