RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 PRPF3O43395 683 aaKnown RBP18.53■□□□□ 0.56
H3F3C-201ENST00000340398 CDC45O75419 566 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 EYA4O95677 639 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
H3F3C-201ENST00000340398 RCAN1P53805 252 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 ERVFC1P60507 584 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 ZNF746Q6NUN9 644 aaPredicted RBP18.53■□□□□ 0.56
H3F3C-201ENST00000340398 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
H3F3C-201ENST00000340398 REXO1Q8N1G1 1221 aaKnown RBP18.53■□□□□ 0.56
H3F3C-201ENST00000340398 KCNB2Q92953 911 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 TLE6Q9H808 572 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 C1orf112Q9NSG2 853 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 PCDHB12Q9Y5F1 795 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 SNX14Q9Y5W7 946 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 WDR81Q562E7 1941 aa18.53■□□□□ 0.56
H3F3C-201ENST00000340398 ESYT2A0FGR8 921 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 FGF18O76093 207 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 PSAPP07602 524 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 CLCN3P51790 818 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 FAM189BP81408 668 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 DSC3Q14574 896 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 EFCAB12Q6NXP0 572 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 HFE2Q6ZVN8 426 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 GJA10Q969M2 543 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 PPP2R3CQ969Q6 453 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 CWH43Q9H720 699 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 SAMM50Q9Y512 469 aa18.52■□□□□ 0.56
H3F3C-201ENST00000340398 ZNF862O60290 1169 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 NLRP11P59045 1033 aaKnown RBP18.51■□□□□ 0.55
H3F3C-201ENST00000340398 NTRK3Q16288 839 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 LRRC55Q6ZSA7 311 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 ALYREFQ86V81 257 aaKnown RBP18.51■□□□□ 0.55
H3F3C-201ENST00000340398 LRRC71Q8N4P6 559 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 COLGALT1Q8NBJ5 622 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 SMRP1Q8NCR6 262 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 VN1R2Q8NFZ6 395 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 LENG9Q96B70 501 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
H3F3C-201ENST00000340398 ATP6V0A4Q9HBG4 840 aa18.51■□□□□ 0.55
H3F3C-201ENST00000340398 TECTAO75443 2155 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 GNA11P29992 359 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 CIITAP33076 1130 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 CCT2P78371 535 aaKnown RBP18.5■□□□□ 0.55
H3F3C-201ENST00000340398 COASYQ13057 564 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 HERC4Q5GLZ8 1057 aaPredicted RBP18.5■□□□□ 0.55
H3F3C-201ENST00000340398 ODR4Q5SWX8 454 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 BLOC1S2Q6QNY1 142 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
H3F3C-201ENST00000340398 THNSL1Q8IYQ7 743 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 ADAMTS10Q9H324 1103 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 TLR9Q9NR96 1032 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 AAASQ9NRG9 546 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 RNF19AQ9NV58 838 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 TMEM161AQ9NX61 479 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 VPS54Q9P1Q0 977 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 AKT3Q9Y243 479 aa18.5■□□□□ 0.55
H3F3C-201ENST00000340398 USP15Q9Y4E8 981 aaPredicted RBP18.5■□□□□ 0.55
H3F3C-201ENST00000340398 MSH4O15457 936 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 MAGEB2O15479 319 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 FGFR4P22455 802 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 RPS6KB1P23443 525 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 HSPA4P34932 840 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
H3F3C-201ENST00000340398 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
H3F3C-201ENST00000340398 MCTP2Q6DN12 878 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 LINC01465Q8N7H1 131 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 CCDC12Q8WUD4 166 aaPredicted RBP18.49■□□□□ 0.55
H3F3C-201ENST00000340398 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 FBXL18Q96ME1 805 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 CASD1Q96PB1 797 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 NCOA5Q9HCD5 579 aaKnown RBP18.49■□□□□ 0.55
H3F3C-201ENST00000340398 TCEAL9Q9UHQ7 104 aa18.49■□□□□ 0.55
H3F3C-201ENST00000340398 PBX3P40426 434 aa18.48■□□□□ 0.55
H3F3C-201ENST00000340398 UBE3AQ05086 875 aa18.48■□□□□ 0.55
H3F3C-201ENST00000340398 UGCGQ16739 394 aa18.48■□□□□ 0.55
H3F3C-201ENST00000340398 ELAC1Q9H777 363 aaKnown RBP18.48■□□□□ 0.55
H3F3C-201ENST00000340398 DISC1Q9NRI5 854 aa18.48■□□□□ 0.55
H3F3C-201ENST00000340398 PIEZO1Q92508 2521 aa18.48■□□□□ 0.55
H3F3C-201ENST00000340398 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 LOC730098B7Z3J9 87 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 FSCN2O14926 492 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 CHMP2AO43633 222 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 CSDE1O75534 798 aaKnown RBP18.47■□□□□ 0.55
H3F3C-201ENST00000340398 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
H3F3C-201ENST00000340398 PDIA3P30101 505 aaKnown RBP18.47■□□□□ 0.55
H3F3C-201ENST00000340398 DUSP6Q16828 381 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 PLPP4Q5VZY2 271 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 RNF169Q8NCN4 708 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 EDAQ92838 391 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 RPGRIP1Q96KN7 1286 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 UNC45AQ9H3U1 944 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 NRBP2Q9NSY0 501 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
H3F3C-201ENST00000340398 CEP131Q9UPN4 1083 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 ZNF318Q5VUA4 2279 aa18.47■□□□□ 0.55
H3F3C-201ENST00000340398 OATP04181 439 aa18.46■□□□□ 0.55
H3F3C-201ENST00000340398 ZSCAN20P17040 1043 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms