RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
CSRP1-201ENST00000340006 NBPF20Q3BBV1 942 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 EXOC8Q8IYI6 725 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 METTL13Q8N6R0 699 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 TRAPPC12Q8WVT3 735 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 TRIM9Q9C026 710 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 KCND2Q9NZV8 630 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 FRMPD3Q5JV73 1810 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 RRN3P2A6NIE6 340 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 SMIM10L2AP0DMW4 78 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 SMIM10L2BP0DMW5 78 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 KLRC1P26715 233 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 FAM102BQ5T8I3 360 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
CSRP1-201ENST00000340006 CCDC47Q96A33 483 aaKnown RBP16.38■□□□□ 0.21
CSRP1-201ENST00000340006 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 OGDHLQ9ULD0 1010 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
CSRP1-201ENST00000340006 MYH11P35749 1972 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 HAS3O00219 553 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 GNAT1P11488 350 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 DPYDQ12882 1025 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 GIT2Q14161 759 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 TARBP2Q15633 366 aaKnown RBP16.37■□□□□ 0.21
CSRP1-201ENST00000340006 GRIK4Q16099 956 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 RETREG2Q8NC44 543 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 HDAC6Q9UBN7 1215 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 DNM1LO00429 736 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 RFC5P40937 340 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 DNM2P50570 870 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 EFCAB12Q6NXP0 572 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 CCDC65Q8IXS2 484 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 JPH2Q9BR39 696 aaPredicted RBP16.37■□□□□ 0.21
CSRP1-201ENST00000340006 REEP2Q9BRK0 252 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 PANK4Q9NVE7 773 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 PPME1Q9Y570 386 aa16.37■□□□□ 0.21
CSRP1-201ENST00000340006 C17orf102A2RUQ5 167 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 ZBTB42B2RXF5 422 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 MAGEB2O15479 319 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 TBCAO75347 108 aaKnown RBP16.36■□□□□ 0.21
CSRP1-201ENST00000340006 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
CSRP1-201ENST00000340006 FAM13AO94988 1023 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 RPN1P04843 607 aaKnown RBP16.36■□□□□ 0.21
CSRP1-201ENST00000340006 ITGA7Q13683 1181 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 MCPH1Q8NEM0 835 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 DNAJC19Q96DA6 116 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 ARID2Q68CP9 1835 aa16.36■□□□□ 0.21
CSRP1-201ENST00000340006 TRIP12Q14669 1992 aaPredicted RBP16.36■□□□□ 0.21
CSRP1-201ENST00000340006 COL1A2P08123 1366 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
CSRP1-201ENST00000340006 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 BIN1O00499 593 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 HIP1RO75146 1068 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 GUCY2CP25092 1073 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 TMOD1P28289 359 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 GJA8P48165 433 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 SOX10P56693 466 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 EMC2Q15006 297 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 HERC4Q5GLZ8 1057 aaPredicted RBP16.35■□□□□ 0.21
CSRP1-201ENST00000340006 MTHFD1LQ6UB35 978 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 GSDMAQ96QA5 445 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
CSRP1-201ENST00000340006 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
CSRP1-201ENST00000340006 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 RSPH10B2B2RC85 870 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 RSPH10BP0C881 870 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 NFRKBQ6P4R8 1299 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 LRRC71Q8N4P6 559 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 CRISPLD2Q9H0B8 497 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 GPRC5CQ9NQ84 441 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 EXOC1Q9NV70 894 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 PHF24Q9UPV7 400 aa16.35■□□□□ 0.21
CSRP1-201ENST00000340006 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 ZNF200P98182 395 aaPredicted RBP16.34■□□□□ 0.21
CSRP1-201ENST00000340006 KMT5BQ4FZB7 885 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 TCP11Q8WWU5 503 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 CEP89Q96ST8 783 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 TBC1D7Q9P0N9 293 aa16.34■□□□□ 0.21
CSRP1-201ENST00000340006 TUBE1Q9UJT0 475 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms