RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
ZNF648-201ENST00000339948 SLIT3O75094 1523 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 UBOX5O94941 541 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 NEFHP12036 1026 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 MARCKSL1P49006 195 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 GTF2IP78347 998 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 DRAP1Q14919 205 aaPredicted RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ASTE1Q2TB18 679 aaPredicted RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 C2CD6Q53TS8 623 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 LRCH2Q5VUJ6 765 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CYP4F22Q6NT55 531 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 DNAJC12Q9UKB3 198 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CCT8L1PA6NM43 557 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 RASGRF2O14827 1237 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 MED24O75448 989 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 PDHA1P08559 390 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CREB1P16220 341 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 PON1P27169 355 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 HNRNPH3P31942 346 aaKnown RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 COG2Q14746 738 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 C1orf54Q8WWF1 131 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 IQCDQ96DY2 449 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 THAP2Q9H0W7 228 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 CTNNAL1Q9UBT7 734 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 EXOC3O60645 756 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ITIH3Q06033 890 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ZNF662Q6ZS27 426 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 TRIM59Q8IWR1 403 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
ZNF648-201ENST00000339948 ECT2Q9H8V3 914 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
ZNF648-201ENST00000339948 IGF2BP3O00425 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 ANP32DO95626 131 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 NR3C1P04150 777 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 CPNE8Q86YQ8 564 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 NSRP1Q9H0G5 558 aaKnown RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 FAM114A2Q9NRY5 505 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 DDX3XO00571 662 aaKnown RBP eCLIP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 SLC8A1P32418 973 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 PALB2Q86YC2 1186 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 TEX2Q8IWB9 1127 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 DNAJC19Q96DA6 116 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 RASSF9O75901 435 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 ATP6V1G2O95670 118 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 CYP11B2P19099 503 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 STX2P32856 288 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 ELF3P78545 371 aaPredicted RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 NID2Q14112 1375 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 JAMLQ86YT9 394 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 SYCE1Q8N0S2 351 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 WDR66Q8TBY9 1149 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 KRT35Q92764 455 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 TATDN2Q93075 761 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 DDX23Q9BUQ8 820 aaKnown RBP12.56□□□□□ -0.4
ZNF648-201ENST00000339948 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
ZNF648-201ENST00000339948 WDR91A4D1P6 747 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 CALCAP01258 141 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
ZNF648-201ENST00000339948 PCK1P35558 622 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 RNASELQ05823 741 aaKnown RBP12.55□□□□□ -0.4
ZNF648-201ENST00000339948 SHROOM1Q2M3G4 852 aaPredicted RBP12.55□□□□□ -0.4
ZNF648-201ENST00000339948 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 FAM228AQ86W67 206 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 SRRM1Q8IYB3 904 aaKnown RBP12.55□□□□□ -0.4
ZNF648-201ENST00000339948 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 CCDC127Q96BQ5 260 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 MIEF2Q96C03 454 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 LZTS2Q9BRK4 669 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 SLC12A6Q9UHW9 1150 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 IGSF9BQ9UPX0 1349 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 CALUO43852 315 aaPredicted RBP12.55□□□□□ -0.4
ZNF648-201ENST00000339948 GNA14O95837 355 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 DRD4P21917 467 aa12.55□□□□□ -0.4
ZNF648-201ENST00000339948 GSTO1P78417 241 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms