RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 NR1I2O75469 434 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 SLFN14P0C7P3 912 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 RFC5P40937 340 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 TRIM60Q495X7 471 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 RINT1Q6NUQ1 792 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 SV2BQ7L1I2 683 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 SUGCTQ9HAC7 445 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 PDLIM7Q9NR12 457 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 PCDHA2Q9Y5H9 948 aa24.67■■□□□ 1.54
SDC3-202ENST00000339394 MYH9P35579 1960 aaKnown RBP24.66■■□□□ 1.54
SDC3-202ENST00000339394 EFCAB12Q6NXP0 572 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 C1orf186Q6ZWK4 172 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 EXOC8Q8IYI6 725 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 CEP57L1Q8IYX8 460 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 METTL13Q8N6R0 699 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 TOX2Q96NM4 488 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 RUSC1Q9BVN2 902 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 KBTBD4Q9NVX7 518 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 NOD1Q9Y239 953 aa24.66■■□□□ 1.54
SDC3-202ENST00000339394 CD4P01730 458 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 CYP11B2P19099 503 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 RTP1P59025 263 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 TLE2Q04725 743 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 ARSHQ5FYA8 562 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 RUFY4Q6ZNE9 571 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 SERINC5Q86VE9 423 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 LRRC71Q8N4P6 559 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 RETREG2Q8NC44 543 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 STAMQ92783 540 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 MTRQ99707 1265 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 JPH2Q9BR39 696 aaPredicted RBP24.65■■□□□ 1.54
SDC3-202ENST00000339394 ATP6V0A4Q9HBG4 840 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 XPNPEP1Q9NQW7 623 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 USP25Q9UHP3 1055 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 ATP11BQ9Y2G3 1177 aa24.65■■□□□ 1.54
SDC3-202ENST00000339394 WDR81Q562E7 1941 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 CYP2C9P11712 490 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 EMC2Q15006 297 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 MAEAQ7L5Y9 396 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 GPBP1Q86WP2 473 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 CNNM3Q8NE01 707 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 TNMDQ9H2S6 317 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 MAGEF1Q9HAY2 307 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 KCND2Q9NZV8 630 aa24.64■■□□□ 1.54
SDC3-202ENST00000339394 DCDC2CA8MYV0 355 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 CLCN3P51790 818 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 MKRN4PQ13434 485 aaPredicted RBP24.63■■□□□ 1.53
SDC3-202ENST00000339394 DRP2Q13474 957 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 TAF2Q6P1X5 1199 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 KRBA2Q6ZNG9 492 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 LINC01465Q8N7H1 131 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 SMIM35A0A1B0GVV1 85 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 TMOD1P28289 359 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 RAD51AP2Q09MP3 1159 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 FAAP100Q0VG06 881 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 KIAA0319LQ8IZA0 1049 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 MCPH1Q8NEM0 835 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 WNT8BQ93098 351 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 TMEM143Q96AN5 459 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 PAGE5Q96GU1 130 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 FAM49AQ9H0Q0 323 aaPredicted RBP24.63■■□□□ 1.53
SDC3-202ENST00000339394 DACT1Q9NYF0 836 aa24.63■■□□□ 1.53
SDC3-202ENST00000339394 NPHP3-ACAD11A0A0J9YXS1 232 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 MYMKA6NI61 221 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 TLR3O15455 904 aaKnown RBP24.62■■□□□ 1.53
SDC3-202ENST00000339394 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
SDC3-202ENST00000339394 GUCY2CP25092 1073 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 AFMP43652 599 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 PTK7Q13308 1070 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 DNAJB3Q8WWF6 145 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 POLD4Q9HCU8 107 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 GPRC5CQ9NQ84 441 aa24.62■■□□□ 1.53
SDC3-202ENST00000339394 DNM2P50570 870 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 AMPD3Q01432 767 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 FAM102BQ5T8I3 360 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 GRAMD1CQ8IYS0 662 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 GPT2Q8TD30 523 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 DHX38Q92620 1227 aaKnown RBP24.61■■□□□ 1.53
SDC3-202ENST00000339394 DDX12PQ92771 950 aa24.61■■□□□ 1.53
SDC3-202ENST00000339394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.6■■□□□ 1.53
SDC3-202ENST00000339394 KINO60870 393 aaKnown RBP24.6■■□□□ 1.53
SDC3-202ENST00000339394 TIGD1Q96MW7 591 aa24.6■■□□□ 1.53
SDC3-202ENST00000339394 SUCLA2Q9P2R7 463 aaPredicted RBP24.6■■□□□ 1.53
SDC3-202ENST00000339394 KRT18P05783 430 aaKnown RBP24.59■■□□□ 1.53
SDC3-202ENST00000339394 CACNB1Q02641 598 aaPredicted RBP24.59■■□□□ 1.53
SDC3-202ENST00000339394 GIT2Q14161 759 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 IER5Q5VY09 327 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 DYMQ7RTS9 669 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 SH3RF1Q7Z6J0 888 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 REEP2Q9BRK0 252 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 TIPINQ9BVW5 301 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 TRIM9Q9C026 710 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 LRRC27Q9C0I9 530 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 AKT3Q9Y243 479 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 HIP1RO75146 1068 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 ARL2P36404 184 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 KANK3Q6NY19 840 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 RPAINQ86UA6 219 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 DAW1Q8N136 415 aa24.59■■□□□ 1.53
SDC3-202ENST00000339394 TCP11Q8WWU5 503 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms