RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 SNX12Q9UMY4 172 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 FLT1P17948 1338 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 C5orf60A6NFR6 353 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 NQO1P15559 274 aaKnown RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 ALOX15P16050 662 aaPredicted RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 PAK2Q13177 524 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 BTG3Q14201 252 aaPredicted RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 DZIP1Q86YF9 867 aaKnown RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 CTNNBL1Q8WYA6 563 aaPredicted RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 PSMC4P43686 418 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 UBE4AQ14139 1066 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 GRIK5Q16478 980 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 TDRD12Q587J7 1177 aaKnown RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 IFT81Q8WYA0 676 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 MOV10L1Q9BXT6 1211 aaKnown RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 ZMYND8Q9ULU4 1186 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 TACC1O75410 805 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 SUPT3HO75486 399 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 NFIXQ14938 502 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 MAPKAPK5Q8IW41 473 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 TGFBRAP1Q8WUH2 860 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 DYTNA2CJ06 578 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 F8W031 263 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 M0R2N6 131 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 HIBADHP31937 336 aaKnown RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 TRADDQ15628 312 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 CEP128Q6ZU80 1094 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 SLF2Q8IX21 1173 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 DHTKD1Q96HY7 919 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 DMAP1Q9NPF5 467 aaPredicted RBP13.64□□□□□ -0.23
DFFB-202ENST00000339350 ADAM22Q9P0K1 906 aa13.64□□□□□ -0.23
DFFB-202ENST00000339350 MYH1P12882 1939 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 POTEMA6NI47 508 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 KLRF2D3W0D1 207 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 USO1O60763 962 aaKnown RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 SLC1A4P43007 532 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 CLCN2P51788 898 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 KLC1Q07866 573 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 P3H1Q32P28 736 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 ARFGAP2Q8N6H7 521 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 SMYD1Q8NB12 490 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 CCDC197Q8NCU1 140 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 TAF1DQ9H5J8 278 aaPredicted RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 SLC12A6Q9UHW9 1150 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 N6AMT1Q9Y5N5 214 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 IGF2BP3O00425 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
DFFB-202ENST00000339350 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 FTCDO95954 541 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 GSTT1P30711 240 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 MAGEA1P43355 309 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 PALB2Q86YC2 1186 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 STIM2Q9P246 746 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 ARPP21Q9UBL0 812 aaPredicted RBP13.63□□□□□ -0.23
DFFB-202ENST00000339350 GGT7Q9UJ14 662 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 TMCO1Q9UM00 188 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 NFU1Q9UMS0 254 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 WDR37Q9Y2I8 494 aa13.63□□□□□ -0.23
DFFB-202ENST00000339350 BICDL2A1A5D9 508 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 CEP104O60308 925 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 PENKP01210 267 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 DRD4P21917 467 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 ODF2Q5BJF6 829 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 OR52E8Q6IFG1 317 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 IQCEQ6IPM2 695 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 NANOGNBQ7Z5D8 188 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 TBCKQ8TEA7 893 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
DFFB-202ENST00000339350 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
DFFB-202ENST00000339350 TMEM47Q9BQJ4 181 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms