RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 KRT83P78385 493 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 MRPS9P82933 396 aaKnown RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 BMT2Q1RMZ1 405 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 TRIM59Q8IWR1 403 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 ZC3H3Q8IXZ2 948 aaKnown RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 MYCT1Q8N699 235 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 MNS1Q8NEH6 495 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 NEK11Q8NG66 645 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 WRAP73Q9P2S5 460 aaPredicted RBP12.19□□□□□ -0.46
LRP1-202ENST00000338962 FAM184BQ9ULE4 1060 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 UBIAD1Q9Y5Z9 338 aa12.19□□□□□ -0.46
LRP1-202ENST00000338962 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 SFI1A8K8P3 1242 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 GPR25O00155 361 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 CDK17Q00537 523 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 PGM5Q15124 567 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ZNF569Q5MCW4 686 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 CACNA2D4Q7Z3S7 1137 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 TAAR1Q96RJ0 339 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 MROH8Q9H579 483 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 AGO4Q9HCK5 861 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 RNF146Q9NTX7 359 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 MYO1AQ9UBC5 1043 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ODF2LQ9ULJ1 636 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ARHGEF35A5YM69 484 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 EPHB6O15197 1021 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 MYCLP12524 364 aaPredicted RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 HOXD13P35453 343 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 SP3Q02447 781 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 PLS1Q14651 629 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 PORCNQ9H237 461 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ZSWIM4Q9H7M6 989 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 PXMP2Q9NR77 195 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 ARMCX3Q9UH62 379 aaPredicted RBP12.18□□□□□ -0.46
LRP1-202ENST00000338962 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
LRP1-202ENST00000338962 EIF3DO15371 548 aaKnown RBP eCLIP12.17□□□□□ -0.46
LRP1-202ENST00000338962 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
LRP1-202ENST00000338962 MAPK4P31152 587 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
LRP1-202ENST00000338962 ARHGAP25P42331 645 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 ELF2Q15723 593 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 STXBP4Q6ZWJ1 553 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 KIAA1328Q86T90 577 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 FAM178BQ8IXR5 827 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 CCDC155Q8N6L0 562 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 PDCD2LQ9BRP1 358 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 EDEM3Q9BZQ6 932 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 FBXO40Q9UH90 709 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
LRP1-202ENST00000338962 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
LRP1-202ENST00000338962 CTAGE9A4FU28 777 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 NR3C1P04150 777 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 GUCY2CP25092 1073 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 FRMD5Q7Z6J6 570 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 ABRAQ8N0Z2 381 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 EFCC1Q9HA90 598 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 ASTN1O14525 1302 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 LRRC53A6NM62 1247 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 STRNO43815 780 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 XRCC5P13010 732 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 NMT1P30419 496 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 QARSP47897 775 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 ZNF131P52739 623 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 KCNA1Q09470 495 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 KCNMA1Q12791 1236 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 SPA17Q15506 151 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 CCDC43Q96MW1 224 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 CARD6Q9BX69 1037 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 NUCKS1Q9H1E3 243 aaKnown RBP12.16□□□□□ -0.46
LRP1-202ENST00000338962 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms