RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF263O14978 683 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 ZBTB5O15062 677 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 POLR3GO15318 223 aaPredicted RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 CNMDO75829 334 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 PRPF6O94906 941 aaKnown RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 RHOXF2BP0C7M4 288 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 IDEP14735 1019 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 APBA1Q02410 837 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 FAM26FQ5R3K3 315 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 MAP3K21Q5TCX8 1036 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 CREG2Q8IUH2 290 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 CCDC65Q8IXS2 484 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 C1orf131Q8NDD1 294 aaKnown RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 SNX29Q8TEQ0 813 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 DCAF4Q8WV16 495 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 MKL1Q969V6 931 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 MMS19Q96T76 1030 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
RTN3-201ENST00000338850 HPCAL4Q9UM19 191 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 PCDHA13Q9Y5I0 950 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 COL4A3BPQ9Y5P4 624 aa11.85□□□□□ -0.51
RTN3-201ENST00000338850 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 SLC37A4O43826 429 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 SERPING1P05155 500 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 TXKP42681 527 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 HNRNPH2P55795 449 aaKnown RBP11.84□□□□□ -0.51
RTN3-201ENST00000338850 COASYQ13057 564 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 MCM6Q14566 821 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 NFIL3Q16649 462 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 MORN1Q5T089 497 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 HAUS3Q68CZ6 603 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 LBX2Q6XYB7 198 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
RTN3-201ENST00000338850 LEKR1Q6ZMV7 388 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 PLEKHH3Q7Z736 793 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 SLFN12Q8IYM2 578 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
RTN3-201ENST00000338850 CRYGNQ8WXF5 182 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 DDX12PQ92771 950 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 CAVIN3Q969G5 261 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
RTN3-201ENST00000338850 ZSWIM4Q9H7M6 989 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 PLCB1Q9NQ66 1216 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 TRIM10Q9UDY6 481 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
RTN3-201ENST00000338850 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 PES1O00541 588 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 COBLO75128 1261 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 GFPT2O94808 682 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 TDP2O95551 362 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 EPB41P11171 864 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 EPHB4P54760 987 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 BMT2Q1RMZ1 405 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 HGSNATQ68CP4 663 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 GBP6Q6ZN66 633 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 ANKLE1Q8NAG6 615 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 HAS1Q92839 578 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 RPAP3Q9H6T3 665 aaPredicted RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 AIPL1Q9NZN9 384 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 NYAP2Q9P242 653 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 DDX25Q9UHL0 483 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 PCDHGC5Q9Y5F6 944 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 PCDHA2Q9Y5H9 948 aa11.83□□□□□ -0.52
RTN3-201ENST00000338850 BZW2Q9Y6E2 419 aaKnown RBP11.83□□□□□ -0.52
RTN3-201ENST00000338850 GTPBP10A4D1E9 387 aaKnown RBP11.82□□□□□ -0.52
RTN3-201ENST00000338850 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
RTN3-201ENST00000338850 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
RTN3-201ENST00000338850 AKR1B10O60218 316 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 FOSP01100 380 aaPredicted RBP11.82□□□□□ -0.52
RTN3-201ENST00000338850 AKR1B1P15121 316 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 MUTP22033 750 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
RTN3-201ENST00000338850 RGS2P41220 211 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 MAGEA1P43355 309 aa11.82□□□□□ -0.52
RTN3-201ENST00000338850 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms