RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 AARSP49588 968 aaKnown RBP eCLIP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 WDR11Q9BZH6 1224 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ZMYM3Q14202 1370 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 CPB1P15086 417 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 CMA1P23946 247 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 GPATCH4Q5T3I0 446 aaKnown RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 FMO2Q99518 471 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ORC4O43929 436 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 DDHD2O94830 711 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 H0YC42 278 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 COPEO14579 308 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 RXRBP28702 533 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 COPS2P61201 443 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SPDYE7PQ495Y7 208 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SPDYAQ5MJ70 313 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ANKRD40Q6AI12 368 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SRRM1Q8IYB3 904 aaKnown RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 OR6P1Q8NGX9 317 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 TTC8Q8TAM2 541 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 KRT87PA6NCN2 255 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 RASGRF2O14827 1237 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 C21orf2O43822 256 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 PDIA3P30101 505 aaKnown RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-201ENST00000338508 GLYCTKQ8IVS8 523 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 RMDN1Q96DB5 314 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 CYP4F11Q9HBI6 524 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 EMILIN3Q9NT22 766 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 ANAPC7Q9UJX3 599 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
SHANK2-201ENST00000338508 IRF1P10914 325 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 CAPZA2P47755 286 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 PPP3CCP48454 512 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 WASHC5Q12768 1159 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 KCNV2Q8TDN2 545 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 MRFAP1Q9Y605 127 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 HUS1O60921 280 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 NR5A1Q13285 461 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 DMC1Q14565 340 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 MORF4L2Q15014 288 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 NUGGCQ68CJ6 796 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 VMP1Q96GC9 406 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 PLCG1P19174 1290 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 RAVER2Q9HCJ3 691 aaKnown RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 TMEM161AQ9NX61 479 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ARHGAP10A1A4S6 786 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 LCP1P13796 627 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 SIK1P57059 783 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 EIF4A1P60842 406 aaKnown RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 OCA2Q04671 838 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 NNTQ13423 1086 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■□□ 15.8
SHANK2-201ENST00000338508 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ACAD11Q709F0 780 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 MAPK13O15264 365 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 TJP3O95049 919 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 SH3BGRP55822 239 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 CDC37Q16543 378 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ZNF667Q5HYK9 610 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 PDIK1LQ8N165 341 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 PHF21AQ96BD5 680 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 DCTN4Q9UJW0 460 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 DUOX2Q9NRD8 1548 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 ABCC4O15439 1325 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 RNF103-CHMP3A0A140T963 221 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 PLEKHM3Q6ZWE6 761 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
SHANK2-201ENST00000338508 GYG2O15488 501 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CLDN3O15551 220 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 TBL3Q12788 808 aaKnown RBP12.56□□□□□ -0.4
SHANK2-201ENST00000338508 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 CDHR1Q96JP9 859 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 ARHGEF9O43307 516 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 HMBSP08397 361 aa12.56□□□□□ -0.4
SHANK2-201ENST00000338508 MAN2A1Q16706 1144 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms