RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 VPS54Q9P1Q0 977 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 EPB41L2O43491 1005 aaKnown RBP12.05□□□□□ -0.48
CAPN3-202ENST00000337571 GAS7O60861 476 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 IL9P15248 144 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 CIITAP33076 1130 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 NTRK3Q16288 839 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 TMEM31Q5JXX7 168 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 IER5LQ5T953 404 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 RASGRP4Q8TDF6 673 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 ADAM2Q99965 735 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
CAPN3-202ENST00000337571 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
CAPN3-202ENST00000337571 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 DISC1Q9NRI5 854 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 RGS18Q9NS28 235 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
CAPN3-202ENST00000337571 NID2Q14112 1375 aa12.05□□□□□ -0.48
CAPN3-202ENST00000337571 CSPG5O95196 566 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 MMP1P03956 469 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 NEFLP07196 543 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ALADP13716 330 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ZSCAN20P17040 1043 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ATP4AP20648 1035 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 SFNP31947 248 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 EVCP57679 992 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 EFCAB12Q6NXP0 572 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-202ENST00000337571 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 RIT2Q99578 217 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 TMX1Q9H3N1 280 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
CAPN3-202ENST00000337571 ZBTB42B2RXF5 422 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 MSH4O15457 936 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 CHMP2AO43633 222 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 DEXIO95424 95 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 SEC24BO95487 1268 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 C22orf31O95567 290 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 VTNP04004 478 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 JAK3P52333 1124 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 CRIPAKQ8N1N5 446 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 OSMRQ99650 979 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 HCN4Q9Y3Q4 1203 aa12.03□□□□□ -0.48
CAPN3-202ENST00000337571 NCOR1O75376 2440 aa12.02□□□□□ -0.48
CAPN3-202ENST00000337571 C5orf42Q9H799 3197 aa12.02□□□□□ -0.48
CAPN3-202ENST00000337571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-202ENST00000337571 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 OATP04181 439 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 ITGB1P05556 798 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
CAPN3-202ENST00000337571 CDC42EP1Q00587 391 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 HYAL1Q12794 435 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 STK3Q13188 491 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 COL19A1Q14993 1142 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 POF1BQ8WVV4 589 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 TMEM40Q8WWA1 233 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.49
CAPN3-202ENST00000337571 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.49
CAPN3-202ENST00000337571 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 TMEM161AQ9NX61 479 aa12.02□□□□□ -0.49
CAPN3-202ENST00000337571 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 C9IYK1 514 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 HOXA2O43364 376 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 MGEA5O60502 916 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 GPR37L1O60883 481 aa12.01□□□□□ -0.49
CAPN3-202ENST00000337571 GPR32O75388 356 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms