RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 STAT1P42224 750 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 HSD17B4P51659 736 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 SNRPFP62306 86 aaKnown RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 PPFIA1Q13136 1202 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 ALKBH5Q6P6C2 394 aaKnown RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 HS2ST1Q7LGA3 356 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 C12orf56Q8IXR9 622 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 FAM186BQ8IYM0 893 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 CYP2W1Q8TAV3 490 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 TAF4BQ92750 862 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 SYT11Q9BT88 431 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 STK33Q9BYT3 514 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 GINM1Q9NU53 330 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 RGL1Q9NZL6 768 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 PNMA2Q9UL42 364 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 CCDC188H7C350 402 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 TULP2O00295 520 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 P4HA2O15460 535 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 PPIP5K2O43314 1243 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 LYPLA2O95372 231 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 H2AFZP0C0S5 128 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 ERCC3P19447 782 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 LMNB1P20700 586 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 GGCXP38435 758 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 NAP1L1P55209 391 aaKnown RBP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 SNAP25P60880 206 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 CYP4A11Q02928 519 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 H2AFVQ71UI9 128 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 CD302Q8IX05 232 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 RASGEF1CQ8N431 466 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 SLC30A5Q8TAD4 765 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 SUCLA2Q9P2R7 463 aaPredicted RBP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 TTC7AQ9ULT0 858 aaPredicted RBP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 USP20Q9Y2K6 914 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
CCDC172-201ENST00000333254 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
CCDC172-201ENST00000333254 PMM2O15305 246 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 CFBP00751 764 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 ACTN1P12814 892 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 SOX5P35711 763 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 ECE1P42892 770 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 FMO5P49326 533 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 CASP4P49662 377 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 GYS2P54840 703 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
CCDC172-201ENST00000333254 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
CCDC172-201ENST00000333254 KIAA1755Q5JYT7 1200 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 EMC10Q5UCC4 262 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 TPCN2Q8NHX9 752 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 OLIG1Q8TAK6 271 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 HDAC7Q8WUI4 952 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 MXRA8Q9BRK3 442 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 DBR1Q9UK59 544 aaKnown RBP11.72□□□□□ -0.53
CCDC172-201ENST00000333254 STXBP5LQ9Y2K9 1186 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF536O15090 1300 aa11.72□□□□□ -0.53
CCDC172-201ENST00000333254 ZMYND10O75800 440 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 ICAM1P05362 532 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 CXCR5P32302 372 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 PTGER2P43116 358 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 HADHBP55084 474 aaKnown RBP11.71□□□□□ -0.53
CCDC172-201ENST00000333254 CUL1Q13616 776 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.53
CCDC172-201ENST00000333254 DLGAP5Q15398 846 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 CLUL1Q15846 466 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
CCDC172-201ENST00000333254 SLC17A8Q8NDX2 589 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 ACER1Q8TDN7 264 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 ZBED3Q96IU2 234 aaPredicted RBP11.71□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF577Q9BSK1 485 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 FRMD4BQ9Y2L6 1034 aa11.71□□□□□ -0.53
CCDC172-201ENST00000333254 F8VZ95 297 aa11.71□□□□□ -0.54
CCDC172-201ENST00000333254 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.54
CCDC172-201ENST00000333254 HSF2BPO75031 334 aa11.71□□□□□ -0.54
CCDC172-201ENST00000333254 HEXIM1O94992 359 aaKnown RBP11.71□□□□□ -0.54
CCDC172-201ENST00000333254 FTCDO95954 541 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms