RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 MSRAQ9UJ68 235 aa18.3■□□□□ 0.52
C11orf88-201ENST00000332814 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
C11orf88-201ENST00000332814 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
C11orf88-201ENST00000332814 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
C11orf88-201ENST00000332814 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 AMHP03971 560 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 WDR5P61964 334 aaKnown RBP18.29■□□□□ 0.52
C11orf88-201ENST00000332814 CDC42EP1Q00587 391 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 RESTQ13127 1097 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 PDIA5Q14554 519 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 LPIN1Q14693 890 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 RAB30Q15771 203 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 KIZQ2M2Z5 673 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 PHOSPHO2Q8TCD6 241 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 ANKEF1Q9NU02 776 aa18.29■□□□□ 0.52
C11orf88-201ENST00000332814 VWA3AA6NCI4 1184 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 GAS2O43903 313 aaKnown RBP18.28■□□□□ 0.52
C11orf88-201ENST00000332814 MED24O75448 989 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 RPS6KA5O75582 802 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 RPA1P27694 616 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 CRYBB1P53674 252 aaPredicted RBP18.28■□□□□ 0.52
C11orf88-201ENST00000332814 NLRP11P59045 1033 aaKnown RBP18.28■□□□□ 0.52
C11orf88-201ENST00000332814 EMC2Q15006 297 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 ZNF697Q5TEC3 545 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 ARL6IP4Q66PJ3 421 aaKnown RBP18.28■□□□□ 0.52
C11orf88-201ENST00000332814 CATSPER3Q86XQ3 398 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 TCP11Q8WWU5 503 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 NLRP7Q8WX94 980 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 NACC1Q96RE7 527 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 OSMRQ99650 979 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 MTRQ99707 1265 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 ZBED2Q9BTP6 218 aa18.28■□□□□ 0.52
C11orf88-201ENST00000332814 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
C11orf88-201ENST00000332814 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.52
C11orf88-201ENST00000332814 MUTP22033 750 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 CD52P31358 61 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 NFX1Q12986 1120 aaKnown RBP18.27■□□□□ 0.52
C11orf88-201ENST00000332814 SF3A1Q15459 793 aaKnown RBP18.27■□□□□ 0.52
C11orf88-201ENST00000332814 GPR153Q6NV75 609 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 POTEGQ6S5H5 508 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 LINC01465Q8N7H1 131 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 IGSF22Q8N9C0 903 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 PIGOQ8TEQ8 1089 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 FTHL17Q9BXU8 183 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 ATP6V0A4Q9HBG4 840 aa18.27■□□□□ 0.52
C11orf88-201ENST00000332814 SUCLA2Q9P2R7 463 aaPredicted RBP18.27■□□□□ 0.52
C11orf88-201ENST00000332814 IGKV6-21A0A0C4DH24 114 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 GRXCR1A8MXD5 290 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 GPR182O15218 404 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 DGAT1O75907 488 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 SPATA31C1P0DKV0 1188 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 DNAJB2P25686 324 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 RARRES1P49788 294 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 FAM109BQ6ICB4 259 aaPredicted RBP18.26■□□□□ 0.51
C11orf88-201ENST00000332814 RHPN2Q8IUC4 686 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 HERC6Q8IVU3 1022 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
C11orf88-201ENST00000332814 TIFAQ96CG3 184 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 CDK5RAP3Q96JB5 506 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 OSBPL7Q9BZF2 842 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 TRIOBPQ9H2D6 2365 aa18.26■□□□□ 0.51
C11orf88-201ENST00000332814 ARHGEF35A5YM69 484 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 ZBTB39O15060 712 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 GPR32O75388 356 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 KCNA4P22459 653 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 GPC3P51654 580 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 DEFB103AP81534 67 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 ZRSR1Q15695 479 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 TCTN1Q2MV58 587 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 FOXD4L5Q5VV16 416 aaPredicted RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 RASSF8Q8NHQ8 419 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 FOXD4L4Q8WXT5 416 aaPredicted RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 ZNF668Q96K58 619 aaPredicted RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 NLRP4Q96MN2 994 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 ZNF396Q96N95 335 aaPredicted RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 PBX4Q9BYU1 374 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 GCOM2Q9BZD3 368 aaPredicted RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 DHX33Q9H6R0 707 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 AGO3Q9H9G7 860 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 DBR1Q9UK59 544 aaKnown RBP18.25■□□□□ 0.51
C11orf88-201ENST00000332814 PADI3Q9ULW8 664 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
C11orf88-201ENST00000332814 PP2D1A8MPX8 630 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 RABGGTBP53611 331 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 CEBPZQ03701 1054 aaKnown RBP18.24■□□□□ 0.51
C11orf88-201ENST00000332814 DRP2Q13474 957 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.24■□□□□ 0.51
C11orf88-201ENST00000332814 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
C11orf88-201ENST00000332814 ZNF410Q86VK4 478 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 TMEM143Q96AN5 459 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 AK8Q96MA6 479 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 INO80BQ9C086 356 aaPredicted RBP18.24■□□□□ 0.51
C11orf88-201ENST00000332814 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
C11orf88-201ENST00000332814 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms