RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ATP6V0A4Q9HBG4 840 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 PARVGQ9HBI0 331 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 XPNPEP1Q9NQW7 623 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 CTNND2Q9UQB3 1225 aa13.39□□□□□ -0.27
TRIM49B-201ENST00000332682 SYNRGQ9UMZ2 1314 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 SFI1A8K8P3 1242 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 IKBKBO14920 756 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 IRX5P78411 483 aaPredicted RBP13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 MYL5Q02045 173 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 EMC2Q15006 297 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 MCPH1Q8NEM0 835 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 RNPEPQ9H4A4 650 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 DHX33Q9H6R0 707 aaKnown RBP13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 SEL1LQ9UBV2 794 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 ZNF215Q9UL58 517 aaPredicted RBP13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 PPME1Q9Y570 386 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 CENPFP49454 3210 aa13.38□□□□□ -0.27
TRIM49B-201ENST00000332682 BECN2A8MW95 431 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 H3BRB1 525 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 PSMA7O14818 248 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 HBP1O60381 514 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 F2P00734 622 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 CNGA1P29973 690 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 RFC5P40937 340 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 PPP1R2P41236 205 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 CPT1AP50416 773 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 CASP5P51878 434 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 PAK1Q13153 545 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 STIM1Q13586 685 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 LRRC41Q15345 812 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 ODR4Q5SWX8 454 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 GUF1Q8N442 669 aaKnown RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 SLAIN1Q8ND83 568 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 SLC7A3Q8WY07 619 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 TUT1Q9H6E5 874 aaKnown RBP13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 RWDD2AQ9UIY3 292 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 TRIM17Q9Y577 477 aa13.37□□□□□ -0.27
TRIM49B-201ENST00000332682 PLS3P13797 630 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 SOX10P56693 466 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 GJA9P57773 515 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 NKX3-2P78367 333 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 BEX3Q00994 111 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 FSCN1Q16658 493 aaKnown RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 BRDTQ58F21 947 aaPredicted RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 SCFD1Q8WVM8 642 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 KIFAP3Q92845 792 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 DHTKD1Q96HY7 919 aaPredicted RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 LARSQ9P2J5 1176 aaKnown RBP13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
TRIM49B-201ENST00000332682 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 MAFO75444 373 aaPredicted RBP13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 INHAP05111 366 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 MYBP10242 640 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 RARBP10826 455 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 STX17P56962 302 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 RTP1P59025 263 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 TBC1D8BQ0IIM8 1120 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 L1TD1Q5T7N2 865 aaKnown RBP13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 FAM178BQ8IXR5 827 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 MYOCDQ8IZQ8 938 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 KAT2BQ92831 832 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 P2RX5Q93086 422 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
TRIM49B-201ENST00000332682 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 PPP1R37O75864 691 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 PGK1P00558 417 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 INSRRP14616 1297 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 CCNE1P24864 410 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 GRK4P32298 578 aa13.34□□□□□ -0.27
TRIM49B-201ENST00000332682 BMT2Q1RMZ1 405 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms