RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MYH11P35749 1972 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 MYH10P35580 1976 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 A0A087X0T9 212 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 PDE2AO00408 941 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 PPP1R12BO60237 982 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 FAM228BP0C875 321 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 EIF2AK2P19525 551 aaKnown RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 IRX5P78411 483 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 MAPK7Q13164 816 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 PADI6Q6TGC4 694 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 DAW1Q8N136 415 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 MKNK1Q9BUB5 465 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.05■□□□□ 0.64
DDX28-201ENST00000332395 GCNT4Q9P109 453 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 ADAMTS1Q9UHI8 967 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
DDX28-201ENST00000332395 ZHX2Q9Y6X8 837 aa19.05■□□□□ 0.64
DDX28-201ENST00000332395 GTPBP10A4D1E9 387 aaKnown RBP19.04■□□□□ 0.64
DDX28-201ENST00000332395 PRLRP16471 622 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 USP14P54578 494 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 IRF2BP2Q7Z5L9 587 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 SAMD3Q8N6K7 520 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 GBP3Q9H0R5 595 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 ABCB6Q9NP58 842 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 SIX2Q9NPC8 291 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 AGPAT3Q9NRZ7 376 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 FBXL5Q9UKA1 691 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 BCS1LQ9Y276 419 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 SAMM50Q9Y512 469 aa19.04■□□□□ 0.64
DDX28-201ENST00000332395 BUB1O43683 1085 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 ZBED4O75132 1171 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 SPP2Q13103 211 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 DOCK1Q14185 1865 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 PGM5Q15124 567 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 WDR93Q6P2C0 686 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 CREG2Q8IUH2 290 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 MTFR1LQ9H019 292 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
DDX28-201ENST00000332395 PPP1R37O75864 691 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 PTK2Q05397 1052 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 TRERF1Q96PN7 1200 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 STRA6Q9BX79 667 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 TBC1D22BQ9NU19 505 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 DMAC2Q9NW81 257 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
DDX28-201ENST00000332395 BZW2Q9Y6E2 419 aaKnown RBP19.03■□□□□ 0.64
DDX28-201ENST00000332395 QARSP47897 775 aaKnown RBP19.02■□□□□ 0.64
DDX28-201ENST00000332395 CYP2J2P51589 502 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 NAP1L1P55209 391 aaKnown RBP19.02■□□□□ 0.64
DDX28-201ENST00000332395 DCAF15Q66K64 600 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 IQCEQ6IPM2 695 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 GOLGA5Q8TBA6 731 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 RBM46Q8TBY0 533 aaKnown RBP19.02■□□□□ 0.64
DDX28-201ENST00000332395 COG1Q8WTW3 980 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 RMDN3Q96TC7 470 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 UBXN6Q9BZV1 441 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 DBR1Q9UK59 544 aaKnown RBP19.02■□□□□ 0.64
DDX28-201ENST00000332395 HYOU1Q9Y4L1 999 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 PARP14Q460N5 1801 aa19.02■□□□□ 0.64
DDX28-201ENST00000332395 FZD9O00144 591 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 VWA5AO00534 786 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 MAP2K7O14733 419 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.63
DDX28-201ENST00000332395 TCP1P17987 556 aaKnown RBP19.02■□□□□ 0.63
DDX28-201ENST00000332395 RARRES1P49788 294 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 BACE1P56817 501 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 NAB2Q15742 525 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 NFRKBQ6P4R8 1299 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 RNF207Q6ZRF8 634 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 MAEAQ7L5Y9 396 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 SCYL3Q8IZE3 742 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 ATG4CQ96DT6 458 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 AJAP1Q9UKB5 411 aaPredicted RBP19.02■□□□□ 0.63
DDX28-201ENST00000332395 FRMD4BQ9Y2L6 1034 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 LTBP3Q9NS15 1303 aa19.02■□□□□ 0.63
DDX28-201ENST00000332395 K7ENM7 598 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 TULP2O00295 520 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 FDX1P10109 184 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 KLRC1P26715 233 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 JAM2P57087 298 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 KIAA0753Q2KHM9 967 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 NSMFQ6X4W1 530 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 ZNF571Q7Z3V5 609 aaPredicted RBP19.01■□□□□ 0.63
DDX28-201ENST00000332395 SYCP3Q8IZU3 236 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 WNK4Q96J92 1243 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 PDCD2LQ9BRP1 358 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 PXMP2Q9NR77 195 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.01■□□□□ 0.63
DDX28-201ENST00000332395 L1RE1Q9UN81 338 aa19.01■□□□□ 0.63
DDX28-201ENST00000332395 NCK2O43639 380 aa19■□□□□ 0.63
DDX28-201ENST00000332395 LYPLA2O95372 231 aa19■□□□□ 0.63
DDX28-201ENST00000332395 PRKCIP41743 596 aa19■□□□□ 0.63
DDX28-201ENST00000332395 ZNF572Q7Z3I7 529 aaPredicted RBP19■□□□□ 0.63
DDX28-201ENST00000332395 ZKSCAN4Q969J2 545 aaPredicted RBP19■□□□□ 0.63
DDX28-201ENST00000332395 TLR10Q9BXR5 811 aa19■□□□□ 0.63
DDX28-201ENST00000332395 PACSIN1Q9BY11 444 aa19■□□□□ 0.63
DDX28-201ENST00000332395 LARSQ9P2J5 1176 aaKnown RBP19■□□□□ 0.63
DDX28-201ENST00000332395 TARSL2A2RTX5 802 aaKnown RBP19■□□□□ 0.63
DDX28-201ENST00000332395 FMO5P49326 533 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms