RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TUFT1Q9NNX1 390 aa15.67■□□□□ 0.1
LIMS1-201ENST00000332345 ANKEF1Q9NU02 776 aa15.67■□□□□ 0.1
LIMS1-201ENST00000332345 WRAP73Q9P2S5 460 aaPredicted RBP15.67■□□□□ 0.1
LIMS1-201ENST00000332345 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
LIMS1-201ENST00000332345 GINS2Q9Y248 185 aa15.67■□□□□ 0.1
LIMS1-201ENST00000332345 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 GRXCR1A8MXD5 290 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 BMP15O95972 392 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 VTNP04004 478 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 RPA1P27694 616 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 RFC5P40937 340 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 CLCN3P51790 818 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
LIMS1-201ENST00000332345 NPEPPSP55786 919 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 WDR5P61964 334 aaKnown RBP15.66■□□□□ 0.1
LIMS1-201ENST00000332345 XKR9Q5GH70 373 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 PLA2G4FQ68DD2 849 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 CATSPER3Q86XQ3 398 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 LINC01465Q8N7H1 131 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 CCDC43Q96MW1 224 aaKnown RBP15.66■□□□□ 0.1
LIMS1-201ENST00000332345 NACC1Q96RE7 527 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 CEP89Q96ST8 783 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 SH2D3AQ9BRG2 576 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 OSBPL7Q9BZF2 842 aa15.66■□□□□ 0.1
LIMS1-201ENST00000332345 STX6O43752 255 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 GAS2O43903 313 aaKnown RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 GPR32O75388 356 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 AMHP03971 560 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 SPATA31C1P0DKV0 1188 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 MUTP22033 750 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 POLGP54098 1239 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 NLRP11P59045 1033 aaKnown RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 ATP2C1P98194 919 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 TCTN1Q2MV58 587 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 ARL6IP4Q66PJ3 421 aaKnown RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 FERMT3Q86UX7 667 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 HERC6Q8IVU3 1022 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 IGSF22Q8N9C0 903 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 ZBED2Q9BTP6 218 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 FTHL17Q9BXU8 183 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 PBX4Q9BYU1 374 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 ZSCAN16Q9H4T2 348 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
LIMS1-201ENST00000332345 PCDHA11Q9Y5I1 949 aa15.65■□□□□ 0.1
LIMS1-201ENST00000332345 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 ZBTB39O15060 712 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 GPR182O15218 404 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 DNAJB2P25686 324 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 CD52P31358 61 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 PAK2Q13177 524 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 ZNF697Q5TEC3 545 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 KRT79Q5XKE5 535 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
LIMS1-201ENST00000332345 TCP11Q8WWU5 503 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 TIFAQ96CG3 184 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
LIMS1-201ENST00000332345 AGO3Q9H9G7 860 aaKnown RBP15.64■□□□□ 0.09
LIMS1-201ENST00000332345 CDHR5Q9HBB8 845 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 PADI3Q9ULW8 664 aa15.64■□□□□ 0.09
LIMS1-201ENST00000332345 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 ENPP3O14638 875 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 ASAP2O43150 1006 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 MED24O75448 989 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 CCT6AP40227 531 aaKnown RBP15.63■□□□□ 0.09
LIMS1-201ENST00000332345 PBX2P40425 430 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 GPC3P51654 580 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 RABGGTBP53611 331 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 DEFB103AP81534 67 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 NFX1Q12986 1120 aaKnown RBP15.63■□□□□ 0.09
LIMS1-201ENST00000332345 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
LIMS1-201ENST00000332345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.63■□□□□ 0.096e-12■■■■■ 38.1
LIMS1-201ENST00000332345 PIGOQ8TEQ8 1089 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 NLRP7Q8WX94 980 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 SCLT1Q96NL6 688 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 PPP1R16BQ96T49 567 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 OSMRQ99650 979 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 ADAMTS10Q9H324 1103 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 SLC28A3Q9HAS3 691 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 MTMR6Q9Y217 621 aa15.63■□□□□ 0.09
LIMS1-201ENST00000332345 NOC2LQ9Y3T9 749 aaKnown RBP15.63■□□□□ 0.09
LIMS1-201ENST00000332345 SIP14410 1827 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 TLL1O43897 1013 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 DGAT1O75907 488 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 EIF4BP23588 611 aaKnown RBP15.62■□□□□ 0.09
LIMS1-201ENST00000332345 RARRES1P49788 294 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 IL17AQ16552 155 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 MYOCDQ8IZQ8 938 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 PSPC1Q8WXF1 523 aaKnown RBP15.62■□□□□ 0.09
LIMS1-201ENST00000332345 TOP1MTQ969P6 601 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 RAD9AQ99638 391 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 MTRQ99707 1265 aa15.62■□□□□ 0.09
LIMS1-201ENST00000332345 GCOM2Q9BZD3 368 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms