RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ALCAMQ13740 583 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 CTTNQ14247 550 aaKnown RBP10.52□□□□□ -0.72
C11orf54-201ENST00000331239 ECM1Q16610 540 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 C1orf186Q6ZWK4 172 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 UNC13DQ70J99 1090 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 RNF180Q86T96 592 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 SESTD1Q86VW0 696 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.72
C11orf54-201ENST00000331239 AFG1LQ8WV93 481 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 C16orf70Q9BSU1 422 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 PTCH2Q9Y6C5 1203 aa10.52□□□□□ -0.72
C11orf54-201ENST00000331239 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-201ENST00000331239 POTEFA5A3E0 1075 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 H0YCG3 227 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 DYNC1LI2O43237 492 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-201ENST00000331239 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 KIF20AO95235 890 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 GNAT1P11488 350 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 PRKCEQ02156 737 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 POTEGQ6S5H5 508 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 CCDC65Q8IXS2 484 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 PDILTQ8N807 584 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 BANK1Q8NDB2 785 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 KIFAP3Q92845 792 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 GLG1Q92896 1179 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 SMARCE1Q969G3 411 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 CCDC43Q96MW1 224 aaKnown RBP10.52□□□□□ -0.73
C11orf54-201ENST00000331239 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-201ENST00000331239 PAK6Q9NQU5 681 aaPredicted RBP10.52□□□□□ -0.73
C11orf54-201ENST00000331239 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 CYP26B1Q9NR63 512 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.73
C11orf54-201ENST00000331239 SMTNL1A8MU46 457 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 FOXN1O15353 648 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ASAP2O43150 1006 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 RHOBTB3O94955 611 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 TNNT1P13805 278 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ZNF131P52739 623 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 GSDMDP57764 484 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 NLRP12P59046 1061 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 TPM4P67936 248 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 POU5F1BQ06416 359 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 PLCB4Q15147 1175 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 RINT1Q6NUQ1 792 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 DRC1Q96MC2 740 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 XPNPEP3Q9NQH7 507 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 NRCAMQ92823 1304 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 H3BRB1 525 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ZNF862O60290 1169 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 HSPA1AP0DMV8 641 aaKnown RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 HSPA1BP0DMV9 641 aaKnown RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ELNP15502 786 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 CYP4A11Q02928 519 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 SLC9C1Q4G0N8 1177 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 CCSAPQ6IQ19 270 aaPredicted RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 PADI6Q6TGC4 694 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ANO5Q75V66 913 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 GPBP1Q86WP2 473 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 COPS5Q92905 334 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 BHMT2Q9H2M3 363 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 TUT1Q9H6E5 874 aaKnown RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 DHX33Q9H6R0 707 aaKnown RBP10.51□□□□□ -0.73
C11orf54-201ENST00000331239 SCN10AQ9Y5Y9 1956 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 UBE4BO95155 1302 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
C11orf54-201ENST00000331239 IGKV6-21A0A0C4DH24 114 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 E9PMD0 336 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 BIN1O00499 593 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 CTIFO43310 598 aaKnown RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 MAFO75444 373 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 ATXN8OSP0DMR3 200 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 SKILP12757 684 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 ATP4AP20648 1035 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 HOXC8P31273 242 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 EHHADHQ08426 723 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 MCM6Q14566 821 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 PPP2R5AQ15172 486 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 STXBP4Q6ZWJ1 553 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 KCNK18Q7Z418 384 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 MLKLQ8NB16 471 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 DNAJC19Q96DA6 116 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 CEP89Q96ST8 783 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 ATP6V0A4Q9HBG4 840 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 OLFML3Q9NRN5 406 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 KAT6AQ92794 2004 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 RPN1P04843 607 aaKnown RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 CCZ1BP86790 482 aa10.5□□□□□ -0.73
C11orf54-201ENST00000331239 CCZ1P86791 482 aaPredicted RBP10.5□□□□□ -0.73
C11orf54-201ENST00000331239 PURAQ00577 322 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms