RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TNNI1P19237 187 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 UBA1P22314 1058 aaKnown RBP17.4■□□□□ 0.38
PDGFB-201ENST00000331163 PSMC4P43686 418 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 SPAG1Q07617 926 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 CCL14Q16627 93 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 Q4G0T1 1027 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 SLC25A27O95847 323 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 CASP4P49662 377 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 HSD17B4P51659 736 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 RBL2Q08999 1139 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 RIOX2Q8IUF8 465 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
PDGFB-201ENST00000331163 LRRN2O75325 713 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 KRT19P08727 400 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 NFX1Q12986 1120 aaKnown RBP17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ZFYVE27Q5T4F4 411 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 PLEKHH3Q7Z736 793 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ADSSL1Q8N142 457 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 POLR3FQ9H1D9 316 aaPredicted RBP17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ZFYVE28Q9HCC9 887 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 CDK5RAP2Q96SN8 1893 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 PIK3CDO00329 1044 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 IGF2BP3O00425 579 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDGFB-201ENST00000331163 CTSHP09668 335 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ELNP15502 786 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.37
PDGFB-201ENST00000331163 GSDMDP57764 484 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 GIT2Q14161 759 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 GPR142Q7Z601 462 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 RNF149Q8NC42 400 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 OR6J1Q8NGC5 347 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 RIT2Q99578 217 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
PDGFB-201ENST00000331163 PFASO15067 1338 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 OAS2P29728 719 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 POLR2FP61218 127 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 FKBP3Q00688 224 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 NEDD9Q14511 834 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 KIF22Q14807 665 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 NCAPHQ15003 741 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 HAUS6Q7Z4H7 955 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 PTPN18Q99952 460 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 GBP3Q9H0R5 595 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 SLC5A4Q9NY91 659 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 RWDD2AQ9UIY3 292 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 MYH8P13535 1937 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 XRCC5P13010 732 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 RPL13P26373 211 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 NLRP7Q8WX94 980 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 SEPT1Q8WYJ6 367 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 FNBP1Q96RU3 617 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 BAG1Q99933 345 aaPredicted RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 K7ERI5 159 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 TBX3O15119 743 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 PLA2G4AP47712 749 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 ACOT2P49753 483 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 JAK3P52333 1124 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 LSM14BQ9BX40 385 aaKnown RBP17.38■□□□□ 0.37
PDGFB-201ENST00000331163 SEMA6BQ9H3T3 888 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 FHOD1Q9Y613 1164 aa17.38■□□□□ 0.37
PDGFB-201ENST00000331163 AKR1B15C9JRZ8 316 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 FGFR4P22455 802 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 GNG11P61952 73 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 MAP3K10Q02779 954 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 C7orf25Q9BPX7 421 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 AP5M1Q9H0R1 490 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 ANKRD65E5RJM6 399 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 IKBKBO14920 756 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 TRIM66O15016 1216 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 RHOBTB3O94955 611 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 ARIH2O95376 493 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 PGK1P00558 417 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 ARSHQ5FYA8 562 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 GNASQ5JWF2 1037 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 RBM43Q6ZSC3 357 aaKnown RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 SYT2Q8N9I0 419 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 PSMB7Q99436 277 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 CALUO43852 315 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 GCLMP48507 274 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 RARRES1P49788 294 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 DEFB115Q30KQ5 88 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 SESTD1Q86VW0 696 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 GIMAP8Q8ND71 665 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
PDGFB-201ENST00000331163 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.37■□□□□ 0.37
PDGFB-201ENST00000331163 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 SSTR3P32745 418 aaPredicted RBP17.36■□□□□ 0.37
PDGFB-201ENST00000331163 GPS2Q13227 327 aa17.36■□□□□ 0.37
PDGFB-201ENST00000331163 CRHR2Q13324 411 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms