RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 BANK1Q8NDB2 785 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 CCDC102AQ96A19 550 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 EXOC4Q96A65 974 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 RIT2Q99578 217 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 DMAC2Q9NW81 257 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 COL20A1Q9P218 1284 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 VPS18Q9P253 973 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 FAN1Q9Y2M0 1017 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
TPM3-206ENST00000330188 GRID2IPA4D2P6 1211 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 BCRP11274 1271 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 GUCY2CP25092 1073 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.14
TPM3-206ENST00000330188 GJB7Q6PEY0 223 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 CLEC4DQ8WXI8 215 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 MS4A14Q96JA4 679 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 SELENOOQ9BVL4 669 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 NAGPAQ9UK23 515 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 NENFQ9UMX5 172 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 ARHGEF35A5YM69 484 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 PHF20L1A8MW92 1017 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 DDX39AO00148 427 aaKnown RBP15.92■□□□□ 0.14
TPM3-206ENST00000330188 NFIBO00712 420 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 CXCL9Q07325 125 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 MAPK7Q13164 816 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 CFAP221Q4G0U5 840 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 ODR4Q5SWX8 454 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 IL31RAQ8NI17 732 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 AENQ8WTP8 325 aaKnown RBP15.92■□□□□ 0.14
TPM3-206ENST00000330188 HOOK2Q96ED9 719 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 STRA6Q9BX79 667 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 MED4Q9NPJ6 270 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 AGPAT3Q9NRZ7 376 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 RBM12Q9NTZ6 932 aaKnown RBP15.92■□□□□ 0.14
TPM3-206ENST00000330188 PSD3Q9NYI0 1048 aa15.92■□□□□ 0.14
TPM3-206ENST00000330188 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
TPM3-206ENST00000330188 ATP8B3O60423 1300 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 HIP1RO75146 1068 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 ANXA13P27216 316 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 HSP90B2PQ58FF3 399 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 DAW1Q8N136 415 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 HINFPQ9BQA5 517 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 PPP1R37O75864 691 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 FMO5P49326 533 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 CYP2J2P51589 502 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 MRPS25P82663 173 aaKnown RBP15.91■□□□□ 0.14
TPM3-206ENST00000330188 SLC7A5Q01650 507 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 ALKBH5Q6P6C2 394 aaKnown RBP15.91■□□□□ 0.14
TPM3-206ENST00000330188 MIER3Q7Z3K6 550 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 GDAP1L1Q96MZ0 367 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 KCNH7Q9NS40 1196 aa15.91■□□□□ 0.14
TPM3-206ENST00000330188 PACSIN2Q9UNF0 486 aaPredicted RBP15.91■□□□□ 0.14
TPM3-206ENST00000330188 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
TPM3-206ENST00000330188 WDR46O15213 610 aaKnown RBP15.9■□□□□ 0.14
TPM3-206ENST00000330188 DHX15O43143 795 aaKnown RBP15.9■□□□□ 0.14
TPM3-206ENST00000330188 FLOT1O75955 427 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 SYF2O95926 243 aaKnown RBP15.9■□□□□ 0.14
TPM3-206ENST00000330188 GHRHRQ02643 423 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 DNAAF5Q86Y56 855 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
TPM3-206ENST00000330188 PKD2L1Q9P0L9 805 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 STIM2Q9P246 746 aa15.9■□□□□ 0.14
TPM3-206ENST00000330188 DNA2P51530 1060 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 RASA3Q14644 834 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 INPP4AQ96PE3 977 aaPredicted RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 MYOZ2Q9NPC6 264 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 FRMD4BQ9Y2L6 1034 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 UBIAD1Q9Y5Z9 338 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 P4HBP07237 508 aaKnown RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 FERP16591 822 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 STAT1P42224 750 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 PPP2R5AQ15172 486 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 TKFCQ3LXA3 575 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 CBWD6Q4V339 395 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 GLE1Q53GS7 698 aaKnown RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 CBWD3Q5JTY5 395 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 CBWD5Q5RIA9 395 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 C8orf74Q6P047 294 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 MCF2L2Q86YR7 1114 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 SLC9A9Q8IVB4 645 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 OLIG1Q8TAK6 271 aa15.89■□□□□ 0.13
TPM3-206ENST00000330188 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
TPM3-206ENST00000330188 DDX3XO00571 662 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM3-206ENST00000330188 PHACTR2O75167 634 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 GFPT2O94808 682 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 TRIM49P0CI25 452 aa15.88■□□□□ 0.13
TPM3-206ENST00000330188 TRIM49CP0CI26 452 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms