RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CDC25CP30307 473 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 FLT3P36888 993 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TCIRG1Q13488 830 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 SEC23AQ15436 765 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 MUM1Q2TAK8 710 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TDRD12Q587J7 1177 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 EARS2Q5JPH6 523 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 GALNT17Q6IS24 598 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 DTHD1Q6ZMT9 781 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 GUF1Q8N442 669 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 SRBD1Q8N5C6 995 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 RBM17Q96I25 401 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 MAML3Q96JK9 1138 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 MAGEB18Q96M61 343 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 PLA2G12BQ9BX93 195 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 METTL14Q9HCE5 456 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 DDX43Q9NXZ2 648 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 LNPEPQ9UIQ6 1025 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 ACTL7BQ9Y614 415 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 DCTN3O75935 186 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 MARSP56192 900 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 POLE2P56282 527 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 EVA1CP58658 441 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 KLRC3Q07444 240 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 PABPC4Q13310 644 aaKnown RBP eCLIP9.07□□□□□ -0.96
SKA2-201ENST00000330137 ORC2Q13416 577 aaPredicted RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 MTFR1Q15390 333 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 ZNF365Q70YC5 407 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 GBP5Q96PP8 586 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 NUDCD1Q96RS6 583 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 FAM207AQ9NSI2 230 aaPredicted RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 ATP8A1Q9Y2Q0 1164 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 RGPD2P0DJD1 1756 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 WNT7AO00755 349 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 MAGEB2O15479 319 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TCEA3O75764 348 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TMCC1O94876 653 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 AFPP02771 609 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 RARGP13631 454 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 MYL6BP14649 208 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 GSTT1P30711 240 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 UBA7P41226 1012 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 CLCN2P51788 898 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 PDE4DQ08499 809 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TRMT10CQ7L0Y3 403 aaKnown RBP9.07□□□□□ -0.96
SKA2-201ENST00000330137 NELFCDQ8IXH7 590 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 HES6Q96HZ4 224 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 TRIM9Q9C026 710 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 LRRC27Q9C0I9 530 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 PIDD1Q9HB75 910 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 SAR1AQ9NR31 198 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 STARD13Q9Y3M8 1113 aa9.07□□□□□ -0.96
SKA2-201ENST00000330137 PITPNM2Q9BZ72 1349 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 PCDH11XQ9BZA7 1347 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 A8MUI8 341 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 RASGRF2O14827 1237 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 EPHB6O15197 1021 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 TJP3O95049 919 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 GCP02774 474 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ITGA6P23229 1130 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 RFC5P40937 340 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 LSAMPQ13449 338 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 RGS9BPQ6ZS82 235 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ARHGEF18Q6ZSZ5 1173 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 DDX42Q86XP3 938 aaKnown RBP eCLIP9.06□□□□□ -0.96
SKA2-201ENST00000330137 METTL13Q8N6R0 699 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ANKRD13CQ8N6S4 541 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 DYDC1Q8WWB3 177 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 UTP4Q969X6 686 aaKnown RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 CENPKQ9BS16 269 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 SPZ1Q9BXG8 430 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 IQCGQ9H095 443 aaKnown RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 TAOK3Q9H2K8 898 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.96
SKA2-201ENST00000330137 NKX1-2Q9UD57 310 aaPredicted RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 AMACRQ9UHK6 382 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ZNF510Q9Y2H8 683 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 TBC1D30Q9Y2I9 924 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 DAAM1Q9Y4D1 1078 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 MAPK13O15264 365 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 IDO1P14902 403 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 PDE6AP16499 860 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 ALDH1B1P30837 517 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 TUBP50607 506 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 POLGP54098 1239 aaPredicted RBP9.06□□□□□ -0.96
SKA2-201ENST00000330137 SLC18A1P54219 525 aa9.06□□□□□ -0.96
SKA2-201ENST00000330137 RNASELQ05823 741 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms