RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PTK7Q13308 1070 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 E2F4Q16254 413 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 LRIT3Q3SXY7 679 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 RRAGBQ5VZM2 374 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 B3GNT9Q6UX72 402 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 HAS1Q92839 578 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 DHX58Q96C10 678 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 LRRC27Q9C0I9 530 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 ERAP1Q9NZ08 941 aa18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 ZNF215Q9UL58 517 aaPredicted RBP18.33■□□□□ 0.52
PDLIM1-201ENST00000329399 EYSQ5T1H1 3165 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 INSRRP14616 1297 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 AMPD3Q01432 767 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.522e-9■□□□□ 8
PDLIM1-201ENST00000329399 UGCGQ16739 394 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 USP49Q70CQ1 688 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 OTOP2Q7RTS6 562 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 PLPPR4Q7Z2D5 763 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 TRMT1LQ7Z2T5 733 aaKnown RBP18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 MLKLQ8NB16 471 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 RNF214Q8ND24 703 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 STK17AQ9UEE5 414 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 LRWD1Q9UFC0 647 aa18.32■□□□□ 0.52
PDLIM1-201ENST00000329399 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 GOLGA6L19H0YKK7 550 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 BACH1O14867 736 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 CHMP2AO43633 222 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 NBNO60934 754 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 STAT6P42226 847 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 TPM4P67936 248 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 IGBP1P78318 339 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 RBL2Q08999 1139 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 GRIK4Q16099 956 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 LRCH2Q5VUJ6 765 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 ZNF746Q6NUN9 644 aaPredicted RBP18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 CABP7Q86V35 215 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 PDILTQ8N807 584 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 PAGE5Q96GU1 130 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 RIT2Q99578 217 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 KCNMB3Q9NPA1 279 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 PCDHA12Q9UN75 941 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 PCDHA5Q9Y5H7 936 aa18.31■□□□□ 0.52
PDLIM1-201ENST00000329399 BECN2A8MW95 431 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 GRXCR1A8MXD5 290 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 EML1O00423 815 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 GTPBP6O43824 516 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 ZNF862O60290 1169 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 GAS7O60861 476 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 SELPP16109 830 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 TXKP42681 527 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 BFSP2Q13515 415 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 RASSF8Q8NHQ8 419 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 AFAP1L1Q8TED9 768 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 AZI2Q9H6S1 392 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 CBX8Q9HC52 389 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 PCDHA10Q9Y5I2 948 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 MAFBQ9Y5Q3 323 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 NRCAMQ92823 1304 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 KDM3AQ9Y4C1 1321 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
PDLIM1-201ENST00000329399 POTEB3A0JP26 581 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 IKBKBO14920 756 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 THPOP40225 353 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 TECP42680 631 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 KRT76Q01546 638 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 PNOCQ13519 176 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 MIS18BP1Q6P0N0 1132 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 PDXDC2PQ6P474 469 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 POTEBQ6S5H4 581 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 LRRC8DQ7L1W4 858 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 ZNF302Q9NR11 478 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 GABBR1Q9UBS5 961 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 VAV3Q9UKW4 847 aa18.29■□□□□ 0.52
PDLIM1-201ENST00000329399 FGBP02675 491 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 IQCB1Q15051 598 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 ERMNQ8TAM6 284 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 CCDC47Q96A33 483 aaKnown RBP18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 TEKT3Q9BXF9 490 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 PANK2Q9BZ23 570 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 TRPC6Q9Y210 931 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 PRUNE2Q8WUY3 3088 aa18.28■□□□□ 0.52
PDLIM1-201ENST00000329399 A0A087X0B3 334 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 STBD1O95210 358 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 CTSHP09668 335 aa18.27■□□□□ 0.52
PDLIM1-201ENST00000329399 DPYDQ12882 1025 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms