RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DDR1Q08345 913 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 SYCE1Q8N0S2 351 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 CPXCR1Q8N123 301 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 BANK1Q8NDB2 785 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 CCT8L2Q96SF2 557 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 K7ENM7 598 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 MEIS2O14770 477 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 FERP16591 822 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 FLT3P36888 993 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 VPS72Q15906 364 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 RUFY4Q6ZNE9 571 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 IRF2BP2Q7Z5L9 587 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 PHLDB2Q86SQ0 1253 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 NLRP14Q86W24 1093 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 PARVGQ9HBI0 331 aa14.01□□□□□ -0.17
HMGCS1-201ENST00000325110 PDXKO00764 312 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 SNHG28P0DPA3 235 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 SSR1P43307 286 aaKnown RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 IFNAR2P48551 515 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 MYL7Q01449 175 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 SYT2Q8N9I0 419 aaPredicted RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 SLC35G2Q8TBE7 412 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 ZNF473Q8WTR7 871 aaKnown RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 ELMO3Q96BJ8 720 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC127Q96BQ5 260 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 DDX3XO00571 662 aaKnown RBP eCLIP14□□□□□ -0.171e-15■■□□□ 13.2
HMGCS1-201ENST00000325110 SPOPO43791 374 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 GJC1P36383 396 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 MDH1P40925 334 aaKnown RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 SP4Q02446 784 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 STXBP4Q6ZWJ1 553 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 IQCKQ8N0W5 287 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 DYDC1Q8WWB3 177 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 SLC35C1Q96A29 364 aa14□□□□□ -0.17
HMGCS1-201ENST00000325110 UBE2TQ9NPD8 197 aaPredicted RBP14□□□□□ -0.17
HMGCS1-201ENST00000325110 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 HMGB1P1B2RPK0 211 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 RDXP35241 583 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 AP3B2Q13367 1082 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 ICE2Q659A1 982 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 APOBEC3HQ6NTF7 200 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 FMO2Q99518 471 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 KCNMB3Q9NPA1 279 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 TMOD2Q9NZR1 351 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 SCAF8Q9UPN6 1271 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 GRIN2DO15399 1336 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 GCLMP48507 274 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 VPS41P49754 854 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 CETN1Q12798 172 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 SF3B2Q13435 895 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 AADACL2Q6P093 401 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 MDM1Q8TC05 714 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 P2RX7Q99572 595 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 PHLPP1O60346 1717 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 SPATA31C1P0DKV0 1188 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 ECE1P42892 770 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 CLK2P49760 499 aaKnown RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 RINT1Q6NUQ1 792 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 NSMFQ6X4W1 530 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 CEP57Q86XR8 500 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 ISCUQ9H1K1 167 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 DAAM1Q9Y4D1 1078 aa13.99□□□□□ -0.17
HMGCS1-201ENST00000325110 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 FOSP01100 380 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 SH3GL2Q99962 352 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 ZNF577Q9BSK1 485 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 EPN3Q9H201 632 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC88AQ3V6T2 1871 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 TISP43B9A030 160 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 DR1Q01658 176 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 CUL1Q13616 776 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 PTGISQ16647 500 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC105Q8IYK2 499 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 THAP2Q9H0W7 228 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 DNAJC18Q9H819 358 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 CTDP1Q9Y5B0 961 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 PCDHA2Q9Y5H9 948 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 RBAK-RBAKDNI3L0D1 243 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 SHOX2O60902 331 aaPredicted RBP13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 CCDC172P0C7W6 258 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 SOX5P35711 763 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 FMO5P49326 533 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 EPHA7Q15375 998 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 C10orf76Q5T2E6 689 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 MIGA2Q7L4E1 593 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
HMGCS1-201ENST00000325110 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms