RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 EPAS1Q99814 870 aa19.69■□□□□ 0.74
TRAPPC12-201ENST00000324266 KCTD10Q9H3F6 313 aa19.69■□□□□ 0.74
TRAPPC12-201ENST00000324266 PNMA6FA0A0J9YX94 578 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 LIN7AO14910 233 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 LINGO3P0C6S8 592 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 SLC9A1P19634 815 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 GCLCP48506 637 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 PTK2Q05397 1052 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 CCDC65Q8IXS2 484 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP38Q8NB14 1042 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 EMILIN3Q9NT22 766 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 COL24A1Q17RW2 1714 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 PPP1R37O75864 691 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 SLURP2P0DP57 97 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 FERP16591 822 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 CLK2P49760 499 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 CASP5P51878 434 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 KDM7AQ6ZMT4 941 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 OSBPL7Q9BZF2 842 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 KDM4CQ9H3R0 1056 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 PAPOLBQ9NRJ5 636 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 AIPL1Q9NZN9 384 aa19.68■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L15C9J2P7 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L10C9JJH3 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L13C9JLJ4 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L11C9JVI0 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L18D6R9N7 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L22D6RA61 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L17D6RBQ6 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L19D6RCP7 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L20D6RJB6 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 FAM107AO95990 144 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 PLCG2P16885 1265 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 CDC25CP30307 473 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L24Q0WX57 530 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 FOXR2Q6PJQ5 311 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP17L6PQ6QN14 398 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 ARHGAP27Q6ZUM4 889 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 KCTD1Q719H9 257 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 MAATS1Q7Z4T9 603 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 PLEKHG4BQ96PX9 1271 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 BLOC1S6Q9UL45 172 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 MYH4Q9Y623 1939 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 RGL2O15211 777 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 KRT18P05783 430 aaKnown RBP19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 SNHG28P0DPA3 235 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 CYP11B2P19099 503 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 NR1D1P20393 614 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 USP4Q13107 963 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 HLTFQ14527 1009 aaKnown RBP eCLIP19.67■□□□□ 0.748e-7■■■□□ 15.1
TRAPPC12-201ENST00000324266 ZNF571Q7Z3V5 609 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 DDX42Q86XP3 938 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 PLAAQ9Y263 795 aa19.67■□□□□ 0.74
TRAPPC12-201ENST00000324266 ZSCAN9O15535 394 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 GNA14O95837 355 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 NR2F2P24468 414 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 SEC24CP53992 1094 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 ERVK-9P63128 1117 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 SEPT2Q15019 361 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 RPS6KA1Q15418 735 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 FAM81AQ8TBF8 368 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 TAF4BQ92750 862 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 ZNF570Q96NI8 536 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 AP1M1Q9BXS5 423 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 PSTPIP2Q9H939 334 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 BAIAP2L1Q9UHR4 511 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 POTEFA5A3E0 1075 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 F8W031 263 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 POTEIP0CG38 1075 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 SCTRP47872 440 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 MARSP56192 900 aaKnown RBP19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 EN1Q05925 392 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 POTEGQ6S5H5 508 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 POTEEQ6S8J3 1075 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 DNAJC14Q6Y2X3 702 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 ARHGAP22Q7Z5H3 698 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 MREGQ8N565 214 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 NT5C3AQ9H0P0 336 aa19.66■□□□□ 0.74
TRAPPC12-201ENST00000324266 MAFGO15525 162 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 CEP104O60308 925 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 MED24O75448 989 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 ANP32DO95626 131 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 ADRA2BP18089 450 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 ELF3P78545 371 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 ARSHQ5FYA8 562 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 CRELD2Q6UXH1 353 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 OR2W6PQ8NHA6 318 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 RAD21O60216 631 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 GNAT1P11488 350 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 TNNC1P63316 161 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 IRF2BP2Q7Z5L9 587 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 TAX1BP1Q86VP1 789 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 CNBD1Q8NA66 436 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 WHAMMQ8TF30 809 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 TSC22D3Q99576 134 aa19.65■□□□□ 0.74
TRAPPC12-201ENST00000324266 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms