RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 RNF40O75150 1001 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 MOCS3O95396 460 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 TFRCP02786 760 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 STAG3L1P0CL83 205 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 RALAP11233 206 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 SKIP12755 728 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 VPS41P49754 854 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 BAATQ14032 418 aaPredicted RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 DNAJC21Q5F1R6 531 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 CDC42EP5Q6NZY7 148 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 ENOSF1Q7L5Y1 443 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 EFHBQ8N7U6 833 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 ENOX1Q8TC92 643 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 PIGOQ8TEQ8 1089 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 DHX38Q92620 1227 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 EPSTI1Q96J88 318 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 IRAK4Q9NWZ3 460 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 MID2Q9UJV3 735 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 CYBBP04839 570 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
CD28-201ENST00000324106 CUL4AQ13619 759 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 SCARA5Q6ZMJ2 495 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 SGMS1Q86VZ5 419 aa9.65□□□□□ -0.86
CD28-201ENST00000324106 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 CALR3Q96L12 384 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 NGRNQ9NPE2 291 aaKnown RBP9.65□□□□□ -0.86
CD28-201ENST00000324106 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 BNIP3LO60238 219 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 PPFIA4O75335 1185 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 KRT1P04264 644 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 NR3C2P08235 984 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 SCP2P22307 547 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 ZBED6P86452 979 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 ZNF543Q08ER8 600 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 VSIG1Q86XK7 387 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 TBC1D10CQ8IV04 446 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 KCTD6Q8NC69 237 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 TDRD7Q8NHU6 1098 aaKnown RBP9.65□□□□□ -0.87
CD28-201ENST00000324106 ATP6V1E2Q96A05 226 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 VPS39Q96JC1 886 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 CARD6Q9BX69 1037 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 RNF14Q9UBS8 474 aa9.65□□□□□ -0.87
CD28-201ENST00000324106 SGK1O00141 431 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 SLC26A4O43511 780 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 INHBAP08476 426 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 ZNF18P17022 549 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 RBBP5Q15291 538 aaKnown RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 DUOXA2Q1HG44 320 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 RHOT2Q8IXI1 618 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 MAGOHBQ96A72 148 aaKnown RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 DYDC2Q96IM9 177 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 NUDCD1Q96RS6 583 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 POLR3FQ9H1D9 316 aaPredicted RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 VCXQ9H320 206 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 SLC38A7Q9NVC3 462 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 LSM7Q9UK45 103 aaKnown RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 BAG5Q9UL15 447 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 PCDHB6Q9Y5E3 794 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 CALB1P05937 261 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 LXNQ9BS40 222 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 TUFT1Q9NNX1 390 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 DYRK4Q9NR20 520 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 VPS18Q9P253 973 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 GDAQ9Y2T3 454 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 UNC13BO14795 1591 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 SPDYE2BA6NHP3 402 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 GPC4O75487 556 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 SPDYE6P0CI01 402 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 CLCN1P35523 988 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 DRP2Q13474 957 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 TTC23LQ6PF05 361 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 FBXO33Q7Z6M2 555 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 CCDC170Q8IYT3 715 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
CD28-201ENST00000324106 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
CD28-201ENST00000324106 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 LRRD1A4D1F6 860 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 MANSC4A6NHS7 340 aaPredicted RBP9.63□□□□□ -0.87
CD28-201ENST00000324106 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 TBX3O15119 743 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 CPP00450 1065 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 PMLP29590 882 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 STX2P32856 288 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 MAP3K21Q5TCX8 1036 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 GKAP1Q5VSY0 366 aaPredicted RBP9.63□□□□□ -0.87
CD28-201ENST00000324106 SMAP1Q8IYB5 467 aaPredicted RBP9.63□□□□□ -0.87
CD28-201ENST00000324106 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 NDST4Q9H3R1 872 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 MROH8Q9H579 483 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 SUPT20HL2P0C7V6 817 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 GYS1P13807 737 aa9.63□□□□□ -0.87
CD28-201ENST00000324106 KRT17Q04695 432 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms