RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 HOMER2Q9NSB8 354 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 NUMBLQ9Y6R0 609 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 GPC5P78333 572 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 RHDQ02161 417 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 MGAT3Q09327 533 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 HIC1Q14526 733 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 TBC1D9Q6ZT07 1266 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 GPR155Q7Z3F1 870 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 FAM160B2Q86V87 743 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 DNASE1L2Q92874 299 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 KIFC2Q96AC6 838 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 OSBPL7Q9BZF2 842 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 CWH43Q9H720 699 aa7.81□□□□□ -1.16
CSTF3-201ENST00000323959 A0A1B0GTL3 188 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 PDE4AP27815 886 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 TMEM87AQ8NBN3 555 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 DNERQ8NFT8 737 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
CSTF3-201ENST00000323959 CRELD1Q96HD1 420 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 STK39Q9UEW8 545 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 KIF26AQ9ULI4 1882 aaPredicted RBP7.8□□□□□ -1.16
CSTF3-201ENST00000323959 K7ESF4 209 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 C1RP00736 705 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 ELAVL4P26378 380 aaKnown RBP7.8□□□□□ -1.16
CSTF3-201ENST00000323959 ALDH7A1P49419 539 aaKnown RBP7.8□□□□□ -1.16
CSTF3-201ENST00000323959 DYNLL1P63167 89 aaKnown RBP7.8□□□□□ -1.16
CSTF3-201ENST00000323959 SATB1Q01826 763 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 PCSK4Q6UW60 755 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 MDM1Q8TC05 714 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 HDAC7Q8WUI4 952 aa7.8□□□□□ -1.16
CSTF3-201ENST00000323959 WDR81Q562E7 1941 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 KIAA1217Q5T5P2 1943 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 PLA2G6O60733 806 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 NDUFB10O96000 172 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 GHRP10912 638 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 CR2P20023 1033 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 POU3F2P20265 443 aaPredicted RBP7.79□□□□□ -1.16
CSTF3-201ENST00000323959 SRSF5Q13243 272 aaKnown RBP7.79□□□□□ -1.16
CSTF3-201ENST00000323959 FBXO47Q5MNV8 452 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 RSPH3Q86UC2 560 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 FCRL3Q96P31 734 aaPredicted RBP7.79□□□□□ -1.16
CSTF3-201ENST00000323959 C1orf112Q9NSG2 853 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 NYAP2Q9P242 653 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 PNMA2Q9UL42 364 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 RHOBTB1O94844 696 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 CXCL14O95715 111 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 NBPF7P0C2Y1 421 aaPredicted RBP7.79□□□□□ -1.16
CSTF3-201ENST00000323959 LRRC32Q14392 662 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 CEP85Q6P2H3 762 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 PHF12Q96QT6 1004 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 MUC22E2RYF6 1773 aaPredicted RBP7.79□□□□□ -1.16
CSTF3-201ENST00000323959 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
CSTF3-201ENST00000323959 ZMYM2Q9UBW7 1377 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 SPAARA0A1B0GVQ0 90 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 SPDYE4A6NLX3 237 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 TBKBP1A7MCY6 615 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 F6X3S4 739 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 PPFIA4O75335 1185 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 UBAP2LQ14157 1087 aaKnown RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 POLA2Q14181 598 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 LRRC69Q6ZNQ3 347 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 CLEC10AQ8IUN9 316 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 ZBP1Q9H171 429 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 OSBPL3Q9H4L5 887 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 EVLQ9UI08 416 aaPredicted RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 PCDHB7Q9Y5E2 793 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 DDX49Q9Y6V7 483 aaKnown RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 FBN2P35556 2912 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 CFAP46Q8IYW2 2715 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 HOXA2O43364 376 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 HMMRO75330 724 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 RPP40O75818 363 aaKnown RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 ARIH2O95376 493 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 CHRNA1P02708 482 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
CSTF3-201ENST00000323959 PLXNB3Q9ULL4 1909 aa7.78□□□□□ -1.16
CSTF3-201ENST00000323959 LNP1A1A4G5 178 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 BCLAF3A2AJT9 711 aaKnown RBP7.77□□□□□ -1.16
CSTF3-201ENST00000323959 CAVIN2O95810 425 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 GNAI2P04899 355 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 SMIM10L2AP0DMW4 78 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 SMIM10L2BP0DMW5 78 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 ALAS1P13196 640 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 KLRC3Q07444 240 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 LMAN2Q12907 356 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 PKDCCQ504Y2 493 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 KBTBD6Q86V97 674 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 TICAM2Q86XR7 235 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 SLC39A11Q8N1S5 342 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 PIP4K2CQ8TBX8 421 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms