RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 XKR9Q5GH70 373 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 PIGOQ8TEQ8 1089 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 SEPT8Q92599 483 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 POLR3CQ9BUI4 534 aaPredicted RBP17.29■□□□□ 0.36
TSFM-201ENST00000323833 TUFT1Q9NNX1 390 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
TSFM-201ENST00000323833 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
TSFM-201ENST00000323833 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 IGKV6-21A0A0C4DH24 114 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 PP2D1A8MPX8 630 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 LYPLA2O95372 231 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 WDR5P61964 334 aaKnown RBP17.28■□□□□ 0.36
TSFM-201ENST00000323833 SMAD3P84022 425 aaKnown RBP17.28■□□□□ 0.36
TSFM-201ENST00000323833 PDIA5Q14554 519 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 DTHD1Q6ZMT9 781 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 TSHZ1Q6ZSZ6 1077 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 ERMNQ8TAM6 284 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 ZNF668Q96K58 619 aaPredicted RBP17.28■□□□□ 0.36
TSFM-201ENST00000323833 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 IFIH1Q9BYX4 1025 aaKnown RBP17.28■□□□□ 0.36
TSFM-201ENST00000323833 AGO3Q9H9G7 860 aaKnown RBP17.28■□□□□ 0.36
TSFM-201ENST00000323833 MYH11P35749 1972 aa17.28■□□□□ 0.36
TSFM-201ENST00000323833 ABHD14A-ACY1A0A1B0GW23 586 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 GPR32O75388 356 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 RPA1P27694 616 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 CDC25AP30304 524 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 CD52P31358 61 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 PBX2P40425 430 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 KCNJ6P48051 423 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 NLRP11P59045 1033 aaKnown RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 DEFB103AP81534 67 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 ECM1Q16610 540 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 POTEGQ6S5H5 508 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSFM-201ENST00000323833 TMCO2Q7Z6W1 182 aaPredicted RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 TMEM40Q8WWA1 233 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
TSFM-201ENST00000323833 OSMRQ99650 979 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 ANKEF1Q9NU02 776 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 CLIC4Q9Y696 253 aa17.27■□□□□ 0.36
TSFM-201ENST00000323833 TCHHQ07283 1943 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 VWA3AA6NCI4 1184 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 ATP2A2P16615 1042 aaKnown RBP17.26■□□□□ 0.35
TSFM-201ENST00000323833 RABGGTBP53611 331 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
TSFM-201ENST00000323833 APBB2Q92870 758 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 ADAMTS10Q9H324 1103 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
TSFM-201ENST00000323833 PADI3Q9ULW8 664 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 NOC2LQ9Y3T9 749 aaKnown RBP17.26■□□□□ 0.35
TSFM-201ENST00000323833 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 TTC3P53804 2025 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 MYO9BQ13459 2157 aa17.26■□□□□ 0.35
TSFM-201ENST00000323833 SZT2Q5T011 3432 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 RFC5P40937 340 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 RARRES1P49788 294 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 DNM2P50570 870 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 GPC3P51654 580 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 CRYBB1P53674 252 aaPredicted RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 CEBPZQ03701 1054 aaKnown RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 EMC2Q15006 297 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 HAUS3Q68CZ6 603 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 SLC7A3Q8WY07 619 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 TMEM143Q96AN5 459 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 SLC9A7Q96T83 725 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 JPH2Q9BR39 696 aaPredicted RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 MMTAG2Q9BU76 263 aaKnown RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 PBX4Q9BYU1 374 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 ZSCAN16Q9H4T2 348 aaPredicted RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 SUCLA2Q9P2R7 463 aaPredicted RBP17.25■□□□□ 0.35
TSFM-201ENST00000323833 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
TSFM-201ENST00000323833 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.24■□□□□ 0.35
TSFM-201ENST00000323833 EFCAB14O75071 495 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 RPS6KA5O75582 802 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSFM-201ENST00000323833 MYOGP15173 224 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 DNAJB2P25686 324 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 PAK2Q13177 524 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 PKP1Q13835 747 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 RHPN2Q8IUC4 686 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 HERC6Q8IVU3 1022 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 USP38Q8NB14 1042 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 PHOSPHO2Q8TCD6 241 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 CCDC43Q96MW1 224 aaKnown RBP17.24■□□□□ 0.35
TSFM-201ENST00000323833 MTRQ99707 1265 aa17.24■□□□□ 0.35
TSFM-201ENST00000323833 XPNPEP1Q9NQW7 623 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms