RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 M0R2N6 131 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 SLC37A4O43826 429 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 GPR32O75388 356 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 RB1P06400 928 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 FGFR1P11362 822 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
TPM3-204ENST00000323144 KLHL23Q8NBE8 558 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 TEKT3Q9BXF9 490 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 SH3GLB2Q9NR46 395 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 DISC1Q9NRI5 854 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 GJB4Q9NTQ9 266 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 PCDHA4Q9UN74 947 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 AKT3Q9Y243 479 aa13.96□□□□□ -0.17
TPM3-204ENST00000323144 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 C9IYK1 514 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 DEXIO95424 95 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 STAG3L1P0CL83 205 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 CRYBB1P53674 252 aaPredicted RBP13.95□□□□□ -0.18
TPM3-204ENST00000323144 SSRP1Q08945 709 aaKnown RBP13.95□□□□□ -0.18
TPM3-204ENST00000323144 DRP2Q13474 957 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 DSC3Q14574 896 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 CTC1Q2NKJ3 1217 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 BLIDQ8IZY5 108 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 NME8Q8N427 588 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 DAGLBQ8NCG7 672 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 ETNPPLQ8TBG4 499 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 P2RX5Q93086 422 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 RGS18Q9NS28 235 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 RNF19AQ9NV58 838 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 SEPT9Q9UHD8 586 aaPredicted RBP13.95□□□□□ -0.18
TPM3-204ENST00000323144 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
TPM3-204ENST00000323144 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 CPLX1O14810 134 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 PSMD10O75832 226 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 GLP2RO95838 553 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 FGFR4P22455 802 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
TPM3-204ENST00000323144 JAK3P52333 1124 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 ZP2Q05996 745 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 SCRN1Q12765 414 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 INF2Q27J81 1249 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 POF1BQ8WVV4 589 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 MAP7D2Q96T17 732 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 RIT2Q99578 217 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 PLVAPQ9BX97 442 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 ADAMTS10Q9H324 1103 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 IGFLR1Q9H665 355 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 CEP131Q9UPN4 1083 aa13.94□□□□□ -0.18
TPM3-204ENST00000323144 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 FAM205CA6NFA0 338 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 EPB41L2O43491 1005 aaKnown RBP13.93□□□□□ -0.18
TPM3-204ENST00000323144 LARGE1O95461 756 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 PBX3P40426 434 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 GPC3P51654 580 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 NLRP11P59045 1033 aaKnown RBP13.93□□□□□ -0.18
TPM3-204ENST00000323144 RBM10P98175 930 aaKnown RBP13.93□□□□□ -0.18
TPM3-204ENST00000323144 MTERF2Q49AM1 385 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 Q4G0T1 1027 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 PLA2G4FQ68DD2 849 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 EFCAB12Q6NXP0 572 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 B3GNT9Q6UX72 402 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 MIER3Q7Z3K6 550 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 GJD3Q8N144 294 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 COLGALT1Q8NBJ5 622 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 SPPL3Q8TCT6 385 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 ZNF274Q96GC6 653 aaPredicted RBP13.93□□□□□ -0.18
TPM3-204ENST00000323144 MBOAT7Q96N66 472 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 C1orf112Q9NSG2 853 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 KMT2EQ8IZD2 1858 aa13.93□□□□□ -0.18
TPM3-204ENST00000323144 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 GPR182O15218 404 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 MBTPS2O43462 519 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 STBD1O95210 358 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
TPM3-204ENST00000323144 SFNP31947 248 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 USP11P51784 963 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■■■■□ 26.2
TPM3-204ENST00000323144 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
TPM3-204ENST00000323144 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
TPM3-204ENST00000323144 SLC24A5Q71RS6 500 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 PHF20Q9BVI0 1012 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 CWH43Q9H720 699 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 TMEM161AQ9NX61 479 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 VAV3Q9UKW4 847 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 TPCN1Q9ULQ1 816 aa13.92□□□□□ -0.18
TPM3-204ENST00000323144 BARX2Q9UMQ3 279 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms