RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 C1orf54Q8WWF1 131 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 BAZ2AQ9UIF9 1905 aaKnown RBP15.4■□□□□ 0.06
PABPC1-201ENST00000318607 SPOPO43791 374 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 CDK8P49336 464 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 PRUNE1Q86TP1 453 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 PALB2Q86YC2 1186 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 BHMT2Q9H2M3 363 aa15.4■□□□□ 0.06
PABPC1-201ENST00000318607 A0A1W2PQJ5 194 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 F8VZ95 297 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 HSPA9P38646 679 aaKnown RBP15.39■□□□□ 0.05
PABPC1-201ENST00000318607 PMS2P54278 862 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 DAB2IPQ5VWQ8 1189 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 PPP4R3AQ6IN85 833 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 SYCP3Q8IZU3 236 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 NEK9Q8TD19 979 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 DDX23Q9BUQ8 820 aaKnown RBP15.39■□□□□ 0.05
PABPC1-201ENST00000318607 PLCB1Q9NQ66 1216 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 RGPD5Q99666 1765 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 RFC4P35249 363 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 BTDP43251 543 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 SCNN1DP51172 638 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
PABPC1-201ENST00000318607 ARMC3Q5W041 872 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 VSIG1Q86XK7 387 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 TPH2Q8IWU9 490 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 TPCN2Q8NHX9 752 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 CUL5Q93034 780 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 HEMGNQ9BXL5 484 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
PABPC1-201ENST00000318607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.39■□□□□ 0.05
PABPC1-201ENST00000318607 USP17L10C9JJH3 530 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SPAG7O75391 227 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 BAG3O95817 575 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 GH1P01241 217 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 GCFC2P16383 781 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 PRLRP16471 622 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 STAT1P42224 750 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 GRM4Q14833 912 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 C12orf60Q5U649 245 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 RBM46Q8TBY0 533 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SCFD1Q8WVM8 642 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 TMEM237Q96Q45 408 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 LOC102724428A0A0B4J2F2 783 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 A0A1W2PRG0 241 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 TBCAO75347 108 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 NEFHP12036 1026 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 USP11P51784 963 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SIK1P57059 783 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 COG2Q14746 738 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 ERICH1Q86X53 443 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SPATS2Q86XZ4 545 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 ACTR5Q9H9F9 607 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 ALG13Q9NP73 1137 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 ANAPC4Q9UJX5 808 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 RASGRF2O14827 1237 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 NMT1P30419 496 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 RBM26Q5T8P6 1007 aaKnown RBP15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 KRT35Q92764 455 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 ARHGEF26Q96DR7 871 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 AK8Q96MA6 479 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 THAP2Q9H0W7 228 aa15.38■□□□□ 0.05
PABPC1-201ENST00000318607 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 A6NNZ2 444 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 AKAP3O75969 853 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 DRD4P21917 467 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 ITPK1Q13572 414 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 CTTNQ14247 550 aaKnown RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 TUBB8Q3ZCM7 444 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 TRPM8Q7Z2W7 1104 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 KIAA0825Q8IV33 1275 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 ATG4AQ8WYN0 398 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 TATDN2Q93075 761 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 PSTPIP2Q9H939 334 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 TCRBV7S2A1N4TA0A589 114 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 EME2A4GXA9 379 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 RASA1P20936 1047 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 NFIXQ14938 502 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 LONP2Q86WA8 852 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 KDM4FA0A1W2PPD8 638 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 TOM1O60784 492 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.052e-12■■■■□ 23.8
PABPC1-201ENST00000318607 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 CUL1Q13616 776 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
PABPC1-201ENST00000318607 THEMIS2Q5TEJ8 643 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 HOOK3Q86VS8 718 aa15.37■□□□□ 0.05
PABPC1-201ENST00000318607 DGKHQ86XP1 1220 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms