RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 SERPINB12Q96P63 405 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 KCNK16Q96T55 309 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 TRAIPQ9BWF2 469 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ETNK1Q9HBU6 452 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 RXFP1Q9HBX9 757 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 MRPL47Q9HD33 250 aaKnown RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 ATAD3AQ9NVI7 634 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 UTP6Q9NYH9 597 aaKnown RBP4.84□□□□□ -1.64
CNOT1-201ENST00000317147 TRPC6Q9Y210 931 aa4.84□□□□□ -1.64
CNOT1-201ENST00000317147 XRN1Q8IZH2 1706 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 AP3B1O00203 1094 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 RANBP6O60518 1105 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TAF5LO75529 589 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 FAM13AO94988 1023 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SCG2P13521 617 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SERPINB6P35237 376 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 MKI67P46013 3256 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SCTRP47872 440 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 NAPAP54920 295 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 GOLGA8FQ08AF8 430 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 GOLGA8DPQ0D2H9 430 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 NR1I3Q14994 352 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 KAZNQ674X7 775 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 MAPK8IP1Q9UQF2 711 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PCDHA13Q9Y5I0 950 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 KRT6AP02538 564 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 KRT6BP04259 564 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 POLR2BP30876 1174 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CTCFP49711 727 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 EVA1CP58658 441 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PDCLQ13371 301 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 XRCC4Q13426 336 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PUM3Q15397 648 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 FAM133BQ5BKY9 247 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 ZMYM1Q5SVZ6 1142 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PDZD4Q76G19 769 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 WDR75Q8IWA0 830 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 DNAJC7Q99615 494 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.83□□□□□ -1.648e-11■■□□□ 14.1
CNOT1-201ENST00000317147 TSPY2A6NKD2 308 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 ZMYND10O75800 440 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PTPREP23469 700 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 HSPA1LP34931 641 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 KRT31Q15323 416 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CRLF3Q8IUI8 442 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CASP10Q92851 521 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CARD9Q9H257 536 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 VPS16Q9H269 839 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 MCM8Q9UJA3 840 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PDS5AQ29RF7 1337 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 EXOC1LA0A1B0GW35 172 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 GOLGA8CPA6NN73 597 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CALB2P22676 271 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 HOXC8P31273 242 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 GUCY2FP51841 1108 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 HORMAD1Q86X24 394 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PRPF31Q8WWY3 499 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PHKBQ93100 1093 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PGM2Q96G03 612 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 WNT8AQ9H1J5 351 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 WDR37Q9Y2I8 494 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 USP6P35125 1406 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 FAM208AQ9UK61 1670 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CACNA1EQ15878 2313 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PVALEFA0A1B0GWK0 134 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 EXOC5O00471 708 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 ATP1A3P13637 1013 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 FNTAP49354 379 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TRADDQ15628 312 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SGMS1Q86VZ5 419 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 IFNL2Q8IZJ0 200 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 BHMTQ93088 406 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 CNOT6LQ96LI5 555 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 BTBD7Q9P203 1132 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 COL4A3BPQ9Y5P4 624 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 MON2Q7Z3U7 1717 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TDRD15B5MCY1 1934 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PABPN1LA6NDY0 278 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 KLHL41O60662 606 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 C4orf22Q6V702 233 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 NLRP9Q7RTR0 991 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PDIK1LQ8N165 341 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 PLBD2Q8NHP8 589 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 C17orf50Q8WW18 174 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 RBM41Q96IZ5 413 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TGS1Q96RS0 853 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 TACC3Q9Y6A5 838 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SPTAN1Q13813 2472 aaKnown RBP4.83□□□□□ -1.64
CNOT1-201ENST00000317147 SCN11AQ9UI33 1791 aa4.83□□□□□ -1.64
CNOT1-201ENST00000317147 MED13Q9UHV7 2174 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 FAM47DPA6NHR8 397 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MAGEA8P43361 318 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 KRT6CP48668 564 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 MTHFSDQ2M296 383 aaKnown RBP4.82□□□□□ -1.64
CNOT1-201ENST00000317147 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
CNOT1-201ENST00000317147 AKNAD1Q5T1N1 836 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms