RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TGFB1I1O43294 461 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 MFAP3LO75121 409 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 RBL2Q08999 1139 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 MIIPQ5JXC2 388 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 ZC3H3Q8IXZ2 948 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 MPHOSPH6Q99547 160 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 GPR20Q99678 358 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 TUBGCP2Q9BSJ2 902 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 MLXIPQ9HAP2 919 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 XPNPEP1Q9NQW7 623 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 MAGEC2Q9UBF1 373 aaPredicted RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 A0A1W2PQC6 194 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 PPP1R37O75864 691 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 TNNT1P13805 278 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 FECHP22830 423 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 MAPK4P31152 587 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 TCF7P36402 384 aaPredicted RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 TRIM14Q14142 442 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 PPFIBP1Q86W92 1011 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 SEPT1Q8WYJ6 367 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 MAML3Q96JK9 1138 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 TSG101Q99816 390 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 ZCCHC17Q9NP64 241 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 TRMT1Q9NXH9 659 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 SEL1LQ9UBV2 794 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 TRAF3IP3Q9Y228 551 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 DIS3Q9Y2L1 958 aaKnown RBP17.35■□□□□ 0.37
CALR-201ENST00000316448 LOXHD1Q8IVV2 1947 aa17.35■□□□□ 0.37
CALR-201ENST00000316448 TXNP10599 105 aaKnown RBP17.34■□□□□ 0.37
CALR-201ENST00000316448 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
CALR-201ENST00000316448 XKR3Q5GH77 459 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 MORN1Q5T089 497 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 OTUD6AQ7L8S5 288 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 ZNF467Q7Z7K2 595 aaPredicted RBP17.34■□□□□ 0.37
CALR-201ENST00000316448 DPP9Q86TI2 863 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 CNGA4Q8IV77 575 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 FAM178BQ8IXR5 827 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 BSNDQ8WZ55 320 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.372e-21■■■■■ 26.8
CALR-201ENST00000316448 DOCK3Q8IZD9 2030 aa17.34■□□□□ 0.37
CALR-201ENST00000316448 RNF225M0QZC1 329 aaPredicted RBP17.33■□□□□ 0.37
CALR-201ENST00000316448 TLR2O60603 784 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 TPM2P07951 284 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 PLS3P13797 630 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.372e-7■■■□□ 16.4
CALR-201ENST00000316448 UBXN1Q04323 297 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 MTERF2Q49AM1 385 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 CCDC51Q96ER9 411 aa17.33■□□□□ 0.37
CALR-201ENST00000316448 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 SLC15A5A6NIM6 579 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 CLIC2O15247 247 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 EIF3DO15371 548 aaKnown RBP eCLIP17.33■□□□□ 0.36
CALR-201ENST00000316448 CCP110O43303 1012 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 DKC1O60832 514 aaKnown RBP eCLIP17.33■□□□□ 0.36
CALR-201ENST00000316448 KIF20AO95235 890 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 OATP04181 439 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 MTIF2P46199 727 aaKnown RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 ARHGAP1Q07960 439 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 PTPN14Q15678 1187 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 DHX37Q8IY37 1157 aaKnown RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 MYRIPQ8NFW9 859 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 CCDC102AQ96A19 550 aa17.33■□□□□ 0.36
CALR-201ENST00000316448 CCDC43Q96MW1 224 aaKnown RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.36
CALR-201ENST00000316448 RASSF10A6NK89 507 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 PDXKO00764 312 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 CTGFP29279 349 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 CASP14P31944 242 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 ADCYAP1R1P41586 468 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 TM4SF4P48230 202 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 DNM2P50570 870 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 STAT5BP51692 787 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 PEX3P56589 373 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 INHBEP58166 350 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 GRM1Q13255 1194 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 CRHR2Q13324 411 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 ADAM9Q13443 819 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 TTLL4Q14679 1199 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 EDRF1Q3B7T1 1238 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 AFAP1L1Q8TED9 768 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 SPATA33Q96N06 139 aa17.32■□□□□ 0.36
CALR-201ENST00000316448 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
CALR-201ENST00000316448 FLRT1Q9NZU1 646 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms