RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RPS6KA2Q15349 733 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 EAPPQ56P03 285 aaPredicted RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 SLFN12LQ6IEE8 588 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 DARS2Q6PI48 645 aaKnown RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 TRIM42Q8IWZ5 723 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 KCTD6Q8NC69 237 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 SPATA4Q8NEY3 305 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 PACSIN2Q9UNF0 486 aaPredicted RBP14.82□□□□□ -0.04
SPAST-201ENST00000315285 AFG3L2Q9Y4W6 797 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 CA4P22748 312 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 USP11P51784 963 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 OSTNP61366 133 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 PDIA5Q14554 519 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 FAM47CQ5HY64 1035 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 MIPOL1Q8TD10 442 aa14.82□□□□□ -0.04
SPAST-201ENST00000315285 TARSL2A2RTX5 802 aaKnown RBP14.81□□□□□ -0.04
SPAST-201ENST00000315285 GPSM2P81274 684 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 BBS9Q3SYG4 887 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 SBK1Q52WX2 424 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 NUGGCQ68CJ6 796 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.047e-6■□□□□ 9.4
SPAST-201ENST00000315285 SEL1LQ9UBV2 794 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 CLTCQ00610 1675 aaKnown RBP14.81□□□□□ -0.04
SPAST-201ENST00000315285 XPOTO43592 962 aaKnown RBP14.81□□□□□ -0.04
SPAST-201ENST00000315285 RCN2Q14257 317 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 ANKRD7Q92527 254 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 ADAM22Q9P0K1 906 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 KCNQ2O43526 872 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 MMEP08473 750 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 SRGNP10124 158 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 ADRA2BP18089 450 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 RHOBTB3O94955 611 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 LUC7L3O95232 432 aaKnown RBP14.81□□□□□ -0.04
SPAST-201ENST00000315285 ACTN1P12814 892 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 SURF1Q15526 300 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
SPAST-201ENST00000315285 SH3BP5O60239 455 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 MAGEA9P43362 315 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 RAD9BQ6WBX8 426 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 CENPUQ71F23 418 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 PDIK1LQ8N165 341 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 MCPH1Q8NEM0 835 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 RMDN3Q96TC7 470 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 SNX12Q9UMY4 172 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 GCKP35557 465 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 IFRD2Q12894 506 aaPredicted RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 SUPT20HL1Q3ZLR7 823 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 OR6B2Q6IFH4 312 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 TAF1DQ9H5J8 278 aaPredicted RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 TXLNGQ9NUQ3 528 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 WDR64B1ANS9 1081 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 ZRANB2O95218 330 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPAST-201ENST00000315285 RPSAP08865 295 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 SF3B3Q15393 1217 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 TADA2BQ86TJ2 420 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 MYCBPQ99417 103 aaPredicted RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 KAZALD1Q96I82 304 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 ELAC2Q9BQ52 826 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 INTS2Q9H0H0 1204 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 ABCB11O95342 1321 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 SLC16A4O15374 487 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 PRPSAP2O60256 369 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 LDHAP00338 332 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 PYROXD1Q8WU10 500 aa14.8□□□□□ -0.04
SPAST-201ENST00000315285 CALR3Q96L12 384 aaKnown RBP14.8□□□□□ -0.04
SPAST-201ENST00000315285 SALL3Q9BXA9 1300 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 ADAMTS13Q76LX8 1427 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 PALM3A6NDB9 673 aaPredicted RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 VAMP7P51809 220 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 MAGOHP61326 146 aaKnown RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 GLYCTKQ8IVS8 523 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 C7orf25Q9BPX7 421 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 C7orf31Q8N865 590 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 TJP3O95049 919 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 ARL4AP40617 200 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 ECE1P42892 770 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 ITKQ08881 620 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 ASPHQ12797 758 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 STK4Q13043 487 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 FRMD5Q7Z6J6 570 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 AGPAT5Q9NUQ2 364 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 NOC2LQ9Y3T9 749 aaKnown RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 CTIFO43310 598 aaKnown RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 TRIM49P0CI25 452 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 TRIM49CP0CI26 452 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 EIF2AK1Q9BQI3 630 aaKnown RBP14.79□□□□□ -0.04
SPAST-201ENST00000315285 HEMGNQ9BXL5 484 aa14.79□□□□□ -0.04
SPAST-201ENST00000315285 KIAA1586Q9HCI6 787 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms