RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 NUDT10Q8NFP7 164 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 NUDT11Q96G61 164 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 KATNBL1Q9H079 304 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 ADAM7Q9H2U9 754 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 Q9UFV3 132 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 SYNPO2Q9UMS6 1093 aa6.2□□□□□ -1.42
GPBP1-202ENST00000309096 BPIP17213 487 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 PTX3P26022 381 aaPredicted RBP6.19□□□□□ -1.42
GPBP1-202ENST00000309096 ETV4P43268 484 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 SESN2P58004 480 aaPredicted RBP6.19□□□□□ -1.42
GPBP1-202ENST00000309096 SMAD3P84022 425 aaKnown RBP6.19□□□□□ -1.42
GPBP1-202ENST00000309096 TOP3AQ13472 1001 aaPredicted RBP6.19□□□□□ -1.42
GPBP1-202ENST00000309096 MOGSQ13724 837 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 ATP13A4Q4VNC1 1196 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 UBXN11Q5T124 520 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 KANK2Q63ZY3 851 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 ZNF610Q8N9Z0 462 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 ZDHHC5Q9C0B5 715 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 SBNO2Q9Y2G9 1366 aa6.19□□□□□ -1.42
GPBP1-202ENST00000309096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 HMGCRP04035 888 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 ADCYAP1R1P41586 468 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 MEOX1P50221 254 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 CD83Q01151 205 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 STRN3Q13033 797 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 EIF4HQ15056 248 aaKnown RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 DDB1Q16531 1140 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 SKOR2Q2VWA4 1001 aaPredicted RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 TMEM200BQ69YZ2 307 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 LRSAM1Q6UWE0 723 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 FRMD7Q6ZUT3 714 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 ESPNLQ6ZVH7 1005 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 KBTBD2Q8IY47 623 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 EMC7Q9NPA0 242 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 SPTLC3Q9NUV7 552 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 KCMF1Q9P0J7 381 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 H2AFY2Q9P0M6 372 aaPredicted RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 VWA7Q9Y334 891 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 ST20-MTHFSA0A0A6YYL1 179 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 PRICKLE3O43900 615 aaPredicted RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 SESN3P58005 492 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 NFKB2Q00653 900 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 NFIXQ14938 502 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 DGKDQ16760 1214 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 ARHGEF18Q6ZSZ5 1173 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 SAE1Q9UBE0 346 aaPredicted RBP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 MCM8Q9UJA3 840 aa6.18□□□□□ -1.42
GPBP1-202ENST00000309096 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.18□□□□□ -1.42
GPBP1-202ENST00000309096 B4GALT3O60512 393 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
GPBP1-202ENST00000309096 CTSWP56202 376 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 ADCY2Q08462 1091 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 TERF2Q15554 542 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 KIAA1841Q6NSI8 718 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 RTKN2Q8IZC4 609 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 UBR7Q8N806 425 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 LPPQ93052 612 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 WNT8AQ9H1J5 351 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 ZMAT4Q9H898 229 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 MSL2Q9HCI7 577 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 INVSQ9Y283 1065 aa6.17□□□□□ -1.42
GPBP1-202ENST00000309096 NOC2LQ9Y3T9 749 aaKnown RBP6.17□□□□□ -1.42
GPBP1-202ENST00000309096 SHROOM4Q9ULL8 1493 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 TGM5O43548 720 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 B4GALT4O60513 344 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 H2AFYO75367 372 aaKnown RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 APOL3O95236 402 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 CSF2RBP32927 897 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 CNR2P34972 360 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 ADCY8P40145 1251 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 RGS3P49796 1198 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 KCNQ1P51787 676 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 PPP2CBP62714 309 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 PPP2CAP67775 309 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 BROXQ5VW32 411 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 ESRP1Q6NXG1 681 aaKnown RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 BMP8AQ7Z5Y6 402 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 ZCRB1Q8TBF4 217 aaKnown RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 RTF1Q92541 710 aaKnown RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 GFM2Q969S9 779 aaKnown RBP6.16□□□□□ -1.42
GPBP1-202ENST00000309096 FERMT2Q96AC1 680 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 MSRAQ9UJ68 235 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 ZNF536O15090 1300 aa6.16□□□□□ -1.42
GPBP1-202ENST00000309096 NEMP1O14524 444 aa6.15□□□□□ -1.43
GPBP1-202ENST00000309096 LAMTOR5O43504 91 aa6.15□□□□□ -1.43
GPBP1-202ENST00000309096 MAN2A1Q16706 1144 aa6.15□□□□□ -1.43
GPBP1-202ENST00000309096 RNF219Q5W0B1 726 aaPredicted RBP6.15□□□□□ -1.43
GPBP1-202ENST00000309096 TRIM68Q6AZZ1 485 aa6.15□□□□□ -1.43
GPBP1-202ENST00000309096 KANSL1Q7Z3B3 1105 aa6.15□□□□□ -1.43
GPBP1-202ENST00000309096 ATL2Q8NHH9 583 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms