RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TXNP10599 105 aaKnown RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 CDC25BP30305 580 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 PPP1R2P41236 205 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 MAP2K5Q13163 448 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 GJC2Q5T442 439 aaPredicted RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 FAM109BQ6ICB4 259 aaPredicted RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 KCNV1Q6PIU1 500 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 EPM2AIP1Q7L775 607 aaPredicted RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 IRF2BP1Q8IU81 584 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 SPC24Q8NBT2 197 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 SCFD1Q8WVM8 642 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 USP6NLQ92738 828 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 NAP1L5Q96NT1 182 aaPredicted RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 VTA1Q9NP79 307 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF302Q9NR11 478 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 INTS13Q9NVM9 706 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 FLRT1Q9NZU1 646 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 ODF2LQ9ULJ1 636 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 COL4A3BPQ9Y5P4 624 aa7.71□□□□□ -1.18
PTCD2-201ENST00000308077 MAFBQ9Y5Q3 323 aaPredicted RBP7.71□□□□□ -1.18
PTCD2-201ENST00000308077 CEP290O15078 2479 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 FAM13AO94988 1023 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MYBP10242 640 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 HOXD13P35453 343 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 TCF7P36402 384 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 TTLL4Q14679 1199 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 TPD52L1Q16890 204 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 ZCWPW2Q504Y3 356 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 XKR9Q5GH70 373 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MAEAQ7L5Y9 396 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MYOCDQ8IZQ8 938 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SCFD2Q8WU76 684 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 TRIM47Q96LD4 638 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 GPR20Q99678 358 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 TINF2Q9BSI4 451 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MLXIPQ9HAP2 919 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 PARVGQ9HBI0 331 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 OLFML3Q9NRN5 406 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 BICDL2A1A5D9 508 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SERPINC1P01008 464 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 GAP43P17677 238 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 NMT1P30419 496 aaKnown RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 ADCYAP1R1P41586 468 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 UBASH3AP57075 661 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 ARHGAP1Q07960 439 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 NOGQ13253 232 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 CCL14Q16627 93 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 NELFCDQ8IXH7 590 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 DHX37Q8IY37 1157 aaKnown RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MYCT1Q8N699 235 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SEPT1Q8WYJ6 367 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 EEF2KMTQ96G04 330 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SPATA33Q96N06 139 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SRRTQ9BXP5 876 aaKnown RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 KCTD10Q9H3F6 313 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 MRPL44Q9H9J2 332 aaKnown RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 GPRC5CQ9NQ84 441 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 PDLIM7Q9NR12 457 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 SEPT9Q9UHD8 586 aaPredicted RBP7.7□□□□□ -1.18
PTCD2-201ENST00000308077 NRBP1Q9UHY1 535 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 GJD2Q9UKL4 321 aa7.7□□□□□ -1.18
PTCD2-201ENST00000308077 ZMYM2Q9UBW7 1377 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KCNJ18B7U540 433 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 NKRFO15226 690 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ADCY6O43306 1168 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 DKC1O60832 514 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 LGR5O75473 907 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 PRPF6O94906 941 aaKnown RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 OATP04181 439 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 HOXC6P09630 235 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CDK11BP21127 795 aaKnown RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CAP1Q01518 475 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KCNA1Q09470 495 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KCNJ12Q14500 433 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KRT31Q15323 416 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 PTPN21Q16825 1174 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 BMT2Q1RMZ1 405 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CCDC144BQ3MJ40 725 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ZC2HC1CQ53FD0 456 aaPredicted RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 XKR3Q5GH77 459 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 TCP11X2Q5H9J9 407 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 LRRC55Q6ZSA7 311 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 OTUD6AQ7L8S5 288 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 TRIM50Q86XT4 487 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CSGALNACT2Q8N6G5 542 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 AFAP1L1Q8TED9 768 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CEP170P1Q96L14 293 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CCDC43Q96MW1 224 aaKnown RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CEP89Q96ST8 783 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ARHGAP39Q9C0H5 1083 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 THAP9Q9H5L6 903 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 XPNPEP1Q9NQW7 623 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CYP26B1Q9NR63 512 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 SEL1LQ9UBV2 794 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 A0A1B0GTH6 734 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 GCNT3O95395 438 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms