RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 MCF2LO15068 1137 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 LARGE1O95461 756 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 KRT1P04264 644 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 CDC42EP1Q00587 391 aa11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 GLIS2Q9BZE0 524 aaPredicted RBP11.55□□□□□ -0.56
SYNPO2-201ENST00000307142 TRAPPC3O43617 180 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 SEPT6Q14141 434 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 RAPH1Q70E73 1250 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 INTS8Q75QN2 995 aaKnown RBP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 STK36Q9NRP7 1315 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 PRRG1O14668 218 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 TDP2O95551 362 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 LINC00301Q8NCQ3 95 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 CEP55Q53EZ4 464 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 GLYCTKQ8IVS8 523 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 DESI2Q9BSY9 194 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 ATF2P15336 505 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 CDC27P30260 824 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 RPS6KA2Q15349 733 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 DARS2Q6PI48 645 aaKnown RBP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 ATG4CQ96DT6 458 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 VPS18Q9P253 973 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 CFAP57Q96MR6 1250 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 ZWILCHQ9H900 591 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 KYAT1Q16773 422 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 HDXQ7Z353 690 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 GPC2Q8N158 579 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
SYNPO2-201ENST00000307142 C17orf102A2RUQ5 167 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 ADORA2BP29275 332 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 THPOP40225 353 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 NAA35Q5VZE5 725 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 SPATA2LQ8IUW3 424 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 PDCD6IPQ8WUM4 868 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 CXCL9Q07325 125 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 NYAP2Q9P242 653 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 PSMA2P25787 234 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 SRBD1Q8N5C6 995 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 PPP4R1Q8TF05 950 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 P3H4Q92791 437 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 SMYD2Q9NRG4 433 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 HDLBPQ00341 1268 aaKnown RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 SNX1Q13596 522 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 TOB2Q14106 344 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 ARHGEF18Q6ZSZ5 1173 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 MB21D2Q8IYB1 491 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 ANGPTL3Q9Y5C1 460 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 CLGNO14967 610 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 PRKCBP05771 671 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 OR1G1P47890 313 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 EXOC4Q96A65 974 aa11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 RBAKQ9NYW8 714 aaPredicted RBP11.53□□□□□ -0.56
SYNPO2-201ENST00000307142 PDHXO00330 501 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 HIP1RO75146 1068 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 GARSP41250 739 aaKnown RBP11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 LRRC63Q05C16 580 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 MXD4Q14582 209 aaPredicted RBP11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 SBK1Q52WX2 424 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 LRRC31Q6UY01 552 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 SEPT1Q8WYJ6 367 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 TTC25Q96NG3 672 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 SAR1BQ9Y6B6 198 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 CAP2P40123 477 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 KRT17Q04695 432 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 SLC10A5Q5PT55 438 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 UNC13DQ70J99 1090 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 PGBD3Q8N328 593 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 AKT1S1Q96B36 256 aa11.52□□□□□ -0.56
SYNPO2-201ENST00000307142 TRIM17Q9Y577 477 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms