RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RAPGEF3O95398 923 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 PCDHGB4Q9UN71 923 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 CNTRLQ7Z7A1 2325 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 COPB2P35606 906 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 TFAP4Q01664 338 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 CHURC1Q8WUH1 139 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 EXOSC4Q9NPD3 245 aaKnown RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 H2AFY2Q9P0M6 372 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 KLHL8Q9P2G9 620 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
TRIM56-201ENST00000306085 SLC13A1Q9BZW2 595 aa14.28□□□□□ -0.12
TRIM56-201ENST00000306085 M0R3G1 203 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 CDH24Q86UP0 819 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 CLEC4FQ8N1N0 589 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 SPATA5Q8NB90 893 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 PRPF18Q99633 342 aaKnown RBP14.27□□□□□ -0.12
TRIM56-201ENST00000306085 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 MTRF1O75570 445 aaKnown RBP14.27□□□□□ -0.12
TRIM56-201ENST00000306085 SLC16A1P53985 500 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 CASP8Q14790 479 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 LRRC47Q8N1G4 583 aaKnown RBP14.27□□□□□ -0.12
TRIM56-201ENST00000306085 FBXO18Q8NFZ0 1043 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 RGS5O15539 181 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 RASSF9O75901 435 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 NDUFA8P51970 172 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 OSTNP61366 133 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 INPP5AQ14642 412 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 ADCK5Q3MIX3 580 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 DCAF4L1Q3SXM0 396 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 LMBRD1Q9NUN5 540 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
TRIM56-201ENST00000306085 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.12
TRIM56-201ENST00000306085 GYS2P54840 703 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 MDH1BQ5I0G3 518 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 ZBTB33Q86T24 672 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.13
TRIM56-201ENST00000306085 SYNDIG1Q9H7V2 258 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 SERPIND1P05546 499 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 PPP2R5BQ15173 497 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 HAUS5O94927 633 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 TJP3O95049 919 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 MRPS25P82663 173 aaKnown RBP14.27□□□□□ -0.13
TRIM56-201ENST00000306085 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 KRT26Q7Z3Y9 468 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 SLC17A8Q8NDX2 589 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.13
TRIM56-201ENST00000306085 ARL4CP56559 192 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 AKIRIN2Q53H80 203 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 CENPPQ6IPU0 288 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 NIM1KQ8IY84 436 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 MRPL11Q9Y3B7 192 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 KRT38O76015 456 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ANGPT2O15123 496 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ALDH18A1P54886 795 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 COG1Q8WTW3 980 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 KMT5AQ9NQR1 393 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 AIPL1Q9NZN9 384 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 PLCH2O75038 1416 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 RNF103O00237 685 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 CLIC6Q96NY7 704 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 DCTPP1Q9H773 170 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 TMA7Q9Y2S6 64 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 MEIS1O00470 390 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 TP53BP2Q13625 1128 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 OR6B2Q6IFH4 312 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 C19orf60Q96EN9 201 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ATXN7L3BQ96GX2 97 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 LINC00854A0A1B0GVQ3 168 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 C11orf88Q6PI97 169 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ZSCAN10Q96SZ4 725 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 SOS2Q07890 1332 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 SNRNP27Q8WVK2 155 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 CDH2P19022 906 aaPredicted RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ITGAXP20702 1163 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 UNC45BQ8IWX7 931 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 RTL3Q8N8U3 475 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 DIS3LQ8TF46 1054 aaKnown RBP14.26□□□□□ -0.13
TRIM56-201ENST00000306085 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 PRKAG2Q9UGJ0 569 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 HEY1Q9Y5J3 304 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 FGGP02679 453 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 CUL3Q13618 768 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 TRIM16LQ309B1 348 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 ETNK1Q9HBU6 452 aa14.26□□□□□ -0.13
TRIM56-201ENST00000306085 UBAP1Q9NZ09 502 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms