RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GCLMP48507 274 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 TSNARE1Q96NA8 513 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 ACCSQ96QU6 501 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 ARHGAP20Q9P2F6 1191 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 PODXLO00592 558 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 MMP10P09238 476 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 MUM1Q2TAK8 710 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 ARHGEF18Q6ZSZ5 1173 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 SLITRK6Q9H5Y7 841 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 MAD2L2Q9UI95 211 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 STAMBPO95630 424 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 BFSP1Q12934 665 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 FBXO33Q7Z6M2 555 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 HDAC7Q8WUI4 952 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 RSAD2Q8WXG1 361 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 ANKS1AQ92625 1134 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 TRIM51Q9BSJ1 452 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 KLC4Q9NSK0 619 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 PI4KBQ9UBF8 816 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 BCS1LQ9Y276 419 aa14.34□□□□□ -0.11
DDX54-201ENST00000306014 SYNGAP1Q96PV0 1343 aa14.33□□□□□ -0.11
DDX54-201ENST00000306014 A0A087X0T9 212 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 ABL1P00519 1130 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 FAM228BP0C875 321 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 RWDD2BP57060 319 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 NAB2Q15742 525 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 BBOF1Q8ND07 529 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 CHMP6Q96FZ7 201 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 TMOD4Q9NZQ9 345 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 KRT19P08727 400 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 LRRC14Q15048 493 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 ANKRD35Q8N283 1001 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 TMEM206Q9H813 350 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 AOC3Q16853 763 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 TMEM139Q8IV31 216 aa14.33□□□□□ -0.12
DDX54-201ENST00000306014 MIF4GDA9UHW6 222 aaKnown RBP14.32□□□□□ -0.12
DDX54-201ENST00000306014 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 FTLP02792 175 aaPredicted RBP14.32□□□□□ -0.12
DDX54-201ENST00000306014 SH3RF1Q7Z6J0 888 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 SREK1Q8WXA9 508 aaKnown RBP14.32□□□□□ -0.12
DDX54-201ENST00000306014 RFFLQ8WZ73 363 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 CLRN2A0PK11 232 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 I3L4J1 428 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 MAN1A1P33908 653 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 STAT2P52630 851 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 GALCP54803 685 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 FRMD5Q7Z6J6 570 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 USP38Q8NB14 1042 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 DEPTORQ8TB45 409 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 VTI1AQ96AJ9 217 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 MTMR4Q9NYA4 1195 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 CFAP157Q5JU67 520 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 FAM47EQ6ZV65 393 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 CELF4Q9BZC1 486 aaKnown RBP14.32□□□□□ -0.12
DDX54-201ENST00000306014 RGL1Q9NZL6 768 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 GPC5P78333 572 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 RPAINQ86UA6 219 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 RILPQ96NA2 401 aa14.32□□□□□ -0.12
DDX54-201ENST00000306014 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
DDX54-201ENST00000306014 LRRC10BA6NIK2 292 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 SLC37A4O43826 429 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 ZBED4O75132 1171 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 NMT1P30419 496 aaKnown RBP14.31□□□□□ -0.12
DDX54-201ENST00000306014 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
DDX54-201ENST00000306014 ARHGAP24Q8N264 748 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 DYDC2Q96IM9 177 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.31□□□□□ -0.12
DDX54-201ENST00000306014 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 GRB10Q13322 594 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 ITPK1Q13572 414 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 FAM20AQ96MK3 541 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 TMEM51Q9NW97 253 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 GH2P01242 217 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 PDHBP11177 359 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 PHBP35232 272 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 SOX5P35711 763 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 FIGNQ5HY92 759 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
DDX54-201ENST00000306014 FLT1P17948 1338 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 SGK1O00141 431 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 VEGFAP15692 232 aaPredicted RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 PIK3CAP42336 1068 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 ZNF449Q6P9G9 518 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 CCDC137Q6PK04 289 aaKnown RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 PARP9Q8IXQ6 854 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 SRRM1Q8IYB3 904 aaKnown RBP14.3□□□□□ -0.12
DDX54-201ENST00000306014 VGLL2Q8N8G2 317 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 CASKIN2Q8WXE0 1202 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 GGT7Q9UJ14 662 aa14.3□□□□□ -0.12
DDX54-201ENST00000306014 ANAPC7Q9UJX3 599 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms