RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ADAM17P78536 824 aa30.17■■■□□ 2.42
HDAC3-201ENST00000305264 EMC2Q15006 297 aa30.17■■■□□ 2.42
HDAC3-201ENST00000305264 SESTD1Q86VW0 696 aa30.17■■■□□ 2.42
HDAC3-201ENST00000305264 PPME1Q9Y570 386 aa30.17■■■□□ 2.42
HDAC3-201ENST00000305264 RRN3P2A6NIE6 340 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 SOX10P56693 466 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 GDF6Q6KF10 455 aaPredicted RBP30.16■■■□□ 2.42
HDAC3-201ENST00000305264 SLC43A3Q8NBI5 491 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 SLC7A3Q8WY07 619 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 ABHD8Q96I13 439 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 BLZF1Q9H2G9 400 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 PDLIM7Q9NR12 457 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 TUBE1Q9UJT0 475 aa30.16■■■□□ 2.42
HDAC3-201ENST00000305264 MAFO75444 373 aaPredicted RBP30.15■■■□□ 2.42
HDAC3-201ENST00000305264 KLRC1P26715 233 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 RFC5P40937 340 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 CACNB1Q02641 598 aaPredicted RBP30.15■■■□□ 2.42
HDAC3-201ENST00000305264 CAMK4Q16566 473 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 MTHFD1LQ6UB35 978 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 MAEAQ7L5Y9 396 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 DYMQ7RTS9 669 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 DDX12PQ92771 950 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 PAWRQ96IZ0 340 aaKnown RBP30.15■■■□□ 2.42
HDAC3-201ENST00000305264 TRIM9Q9C026 710 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 ATP6V0A4Q9HBG4 840 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 POLD4Q9HCU8 107 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 CUL4BQ13620 913 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 CLSTN2Q9H4D0 955 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 KCND2Q9NZV8 630 aa30.15■■■□□ 2.42
HDAC3-201ENST00000305264 MBLAC1A4D2B0 266 aaPredicted RBP30.14■■■□□ 2.42
HDAC3-201ENST00000305264 TREHO43280 583 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 MDM2Q00987 491 aaPredicted RBP30.14■■■□□ 2.42
HDAC3-201ENST00000305264 PNOCQ13519 176 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 KLHL40Q2TBA0 621 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 KANK3Q6NY19 840 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 LRRC71Q8N4P6 559 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 ERCC4Q92889 916 aaPredicted RBP30.14■■■□□ 2.42
HDAC3-201ENST00000305264 REEP2Q9BRK0 252 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 GPRC5CQ9NQ84 441 aa30.14■■■□□ 2.42
HDAC3-201ENST00000305264 IGKV6-21A0A0C4DH24 114 aa30.14■■■□□ 2.41
HDAC3-201ENST00000305264 ARVCFO00192 962 aa30.14■■■□□ 2.41
HDAC3-201ENST00000305264 AMPD3Q01432 767 aa30.14■■■□□ 2.41
HDAC3-201ENST00000305264 POSTNQ15063 836 aa30.14■■■□□ 2.41
HDAC3-201ENST00000305264 KRT18P05783 430 aaKnown RBP30.13■■■□□ 2.41
HDAC3-201ENST00000305264 CAPN2P17655 700 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 GUCY2CP25092 1073 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 ATN1P54259 1190 aaPredicted RBP30.13■■■□□ 2.41
HDAC3-201ENST00000305264 DRP2Q13474 957 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 DNAJC19Q96DA6 116 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 C7orf25Q9BPX7 421 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 C11orf49Q9H6J7 331 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 SUGCTQ9HAC7 445 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 MYH11P35749 1972 aa30.13■■■□□ 2.41
HDAC3-201ENST00000305264 RSPH10B2B2RC85 870 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 RSPH10BP0C881 870 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 GNAT1P11488 350 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 CLCN3P51790 818 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 GIT2Q14161 759 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 METTL13Q8N6R0 699 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 TMEM143Q96AN5 459 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 CCDC34Q96HJ3 373 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 CTAGE1Q96RT6 745 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 NUP62CLQ9H1M0 184 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 TRMT13Q9NUP7 481 aaKnown RBP30.12■■■□□ 2.41
HDAC3-201ENST00000305264 MAGEB2O15479 319 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 GTPBP6O43824 516 aaPredicted RBP30.12■■■□□ 2.41
HDAC3-201ENST00000305264 PTPN11Q06124 597 aaPredicted RBP30.12■■■□□ 2.41
HDAC3-201ENST00000305264 MKRN4PQ13434 485 aaPredicted RBP30.12■■■□□ 2.41
HDAC3-201ENST00000305264 EFCAB12Q6NXP0 572 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 RUFY4Q6ZNE9 571 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 DAW1Q8N136 415 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 LINC01465Q8N7H1 131 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 MCPH1Q8NEM0 835 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 LRRC27Q9C0I9 530 aa30.12■■■□□ 2.41
HDAC3-201ENST00000305264 TRAK2O60296 914 aa30.11■■■□□ 2.41
HDAC3-201ENST00000305264 HIP1RO75146 1068 aa30.11■■■□□ 2.41
HDAC3-201ENST00000305264 MAPK7Q13164 816 aa30.11■■■□□ 2.41
HDAC3-201ENST00000305264 FAM102BQ5T8I3 360 aa30.11■■■□□ 2.41
HDAC3-201ENST00000305264 ELOA2Q8IYF1 753 aaPredicted RBP30.11■■■□□ 2.41
HDAC3-201ENST00000305264 TMEM63CQ9P1W3 806 aa30.11■■■□□ 2.41
HDAC3-201ENST00000305264 CDK7P50613 346 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 ASIC1P78348 528 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 DPYDQ12882 1025 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 CAVIN1Q6NZI2 390 aaKnown RBP30.1■■■□□ 2.41
HDAC3-201ENST00000305264 SLC39A5Q6ZMH5 540 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 PTGISQ16647 500 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 CNNM4Q6P4Q7 775 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 RETREG2Q8NC44 543 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 JPH2Q9BR39 696 aaPredicted RBP30.1■■■□□ 2.41
HDAC3-201ENST00000305264 PCDHA2Q9Y5H9 948 aa30.1■■■□□ 2.41
HDAC3-201ENST00000305264 B4GALT4O60513 344 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 CYP2C9P11712 490 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 NECAB2Q7Z6G3 386 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 UBE2Q1Q7Z7E8 422 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 EXOC8Q8IYI6 725 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 TRPV6Q9H1D0 765 aa30.09■■■□□ 2.41
HDAC3-201ENST00000305264 POLR3FQ9H1D9 316 aaPredicted RBP30.09■■■□□ 2.41
HDAC3-201ENST00000305264 MYL1P05976 194 aa30.08■■■□□ 2.41
HDAC3-201ENST00000305264 SKOR2Q2VWA4 1001 aaPredicted RBP30.08■■■□□ 2.41
HDAC3-201ENST00000305264 TIPINQ9BVW5 301 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms