RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 INTUQ9ULD6 942 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 PACSIN2Q9UNF0 486 aaPredicted RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CFAP221Q4G0U5 840 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 MREGQ8N565 214 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CASKIN2Q8WXE0 1202 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 METTL14Q9HCE5 456 aaKnown RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 F8VZ95 297 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 DHX15O43143 795 aaKnown RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 TNNT3P45378 269 aaPredicted RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CBWD6Q4V339 395 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CBWD3Q5JTY5 395 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CBWD5Q5RIA9 395 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 ACBD3Q9H3P7 528 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CLIC2O15247 247 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 ACTN2P35609 894 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 GBP6Q6ZN66 633 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 PSMB7Q99436 277 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 MKNK1Q9BUB5 465 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 GLIS2Q9BZE0 524 aaPredicted RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 NAGPAQ9UK23 515 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 PTPRFP10586 1907 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 SHTN1A0MZ66 631 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 DDX3XO00571 662 aaKnown RBP eCLIP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 DDX3YO15523 660 aaKnown RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 PSMC2P35998 433 aaKnown RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 GRIPAP1Q4V328 841 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 DAW1Q8N136 415 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 CCDC102AQ96A19 550 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.89□□□□□ -1.15
RGPD3-201ENST00000304514 VCPKMTQ9H867 229 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 GRIN2DO15399 1336 aa7.89□□□□□ -1.15
RGPD3-201ENST00000304514 TBCAO75347 108 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FAM153BP0C7A2 387 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 MAPTP10636 758 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 MRPS25P82663 173 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SPP2Q13103 211 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 KIF22Q14807 665 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 TCEAL1Q15170 157 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FAM153CQ494X1 144 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 DCAF12L1Q5VU92 463 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FKBP1CQ5VVH2 108 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FOXR1Q6PIV2 292 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 NIPA1Q7RTP0 329 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 DNAAF5Q86Y56 855 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 AFAP1L1Q8TED9 768 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SCFD2Q8WU76 684 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 MXRA8Q9BRK3 442 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 PARVGQ9HBI0 331 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SEL1LQ9UBV2 794 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FAM153AQ9UHL3 310 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SSC5DA1L4H1 1573 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ICAM1P05362 532 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 SOX5P35711 763 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 EPS15P42566 896 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 LMAN1P49257 510 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FMO5P49326 533 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 DCAF17Q5H9S7 520 aaPredicted RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 EMBQ6PCB8 327 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 CD302Q8IX05 232 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 HES6Q96HZ4 224 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ZNF577Q9BSK1 485 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 INTS2Q9H0H0 1204 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 AGO4Q9HCK5 861 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 POLD4Q9HCU8 107 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 AGPAT3Q9NRZ7 376 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ZNF219Q9P2Y4 722 aaPredicted RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ADAMTS1Q9UHI8 967 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 DBR1Q9UK59 544 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 IGSF9BQ9UPX0 1349 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 PPIP5K2O43314 1243 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 BCRP11274 1271 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 UBXN2AP68543 259 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 FAM160B2Q86V87 743 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 TPH2Q8IWU9 490 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ZBTB9Q96C00 473 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 GDAP1L1Q96MZ0 367 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 LXNQ9BS40 222 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 GOLGA8KD6RF30 607 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 CHMP2AO43633 222 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 GFPT2O94808 682 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 RPL13P26373 211 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 KIAA0753Q2KHM9 967 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 CEP55Q53EZ4 464 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 C1orf220Q5T0J3 134 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 C8orf74Q6P047 294 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 MYCT1Q8N699 235 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
RGPD3-201ENST00000304514 MRPL11Q9Y3B7 192 aaKnown RBP7.88□□□□□ -1.15
RGPD3-201ENST00000304514 DICER1Q9UPY3 1922 aaKnown RBP7.87□□□□□ -1.15
RGPD3-201ENST00000304514 CLRN2A0PK11 232 aa7.87□□□□□ -1.15
RGPD3-201ENST00000304514 HIP1RO75146 1068 aa7.87□□□□□ -1.15
RGPD3-201ENST00000304514 KIF4AO95239 1232 aa7.87□□□□□ -1.15
RGPD3-201ENST00000304514 ZNF76P36508 570 aa7.87□□□□□ -1.15
RGPD3-201ENST00000304514 ARID5AQ03989 594 aa7.87□□□□□ -1.15
RGPD3-201ENST00000304514 PPP2R5AQ15172 486 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms