RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 LZTS2Q9BRK4 669 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 SYNCQ9H7C4 482 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 MLXIPLQ9NP71 852 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 STIM2Q9P246 746 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 NHSL1Q5SYE7 1610 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 IFNB1P01574 187 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 FAM163BP0C2L3 166 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 SLC9A1P19634 815 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 STAT1P42224 750 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ZBED6P86452 979 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 COASYQ13057 564 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 RBBP5Q15291 538 aaKnown RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 MEA1Q16626 185 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 MAN2A1Q16706 1144 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 QPCTQ16769 361 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 FAM84AQ96KN4 292 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 MTMR4Q9NYA4 1195 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ANKFY1Q9P2R3 1169 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 LIMA1Q9UHB6 759 aaKnown RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 A6NNZ2 444 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 SMNDC1O75940 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
APLF-201ENST00000303795 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 TUBB8Q3ZCM7 444 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ANKRD20A8PQ5CZ79 823 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 KAZNQ674X7 775 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
APLF-201ENST00000303795 MREGQ8N565 214 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 CCDC26Q8TAB7 109 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 SAAL1Q96ER3 474 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 ZNF577Q9BSK1 485 aa12.89□□□□□ -0.35
APLF-201ENST00000303795 DDX47Q9H0S4 455 aaKnown RBP12.89□□□□□ -0.35
APLF-201ENST00000303795 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 ECHS1P30084 290 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 GCLMP48507 274 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 KCNH2Q12809 1159 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 IL17AQ16552 155 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.88□□□□□ -0.35
APLF-201ENST00000303795 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 DHTKD1Q96HY7 919 aaPredicted RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 ZNF263O14978 683 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 KRT19P08727 400 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 ZKSCAN8Q15776 578 aaPredicted RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 CCDC105Q8IYK2 499 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 ZNF570Q96NI8 536 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 FAM118BQ9BPY3 351 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 ABCB11O95342 1321 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 MYH10P35580 1976 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 CARSP49589 748 aaKnown RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 IGBP1P78318 339 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
APLF-201ENST00000303795 PLAAQ9Y263 795 aa12.88□□□□□ -0.35
APLF-201ENST00000303795 RREB1Q92766 1687 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ZSCAN5CA6NGD5 496 aaPredicted RBP12.87□□□□□ -0.35
APLF-201ENST00000303795 PHF20L1A8MW92 1017 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 CCT6BQ92526 530 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ITFG2Q969R8 447 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 DYDC2Q96IM9 177 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
APLF-201ENST00000303795 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 TMEM150BA6NC51 233 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 MAP3K13O43283 966 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 ORC4O43929 436 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 CD19P15391 556 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 PSMC6P62333 389 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 HVCN1Q96D96 273 aa12.87□□□□□ -0.35
APLF-201ENST00000303795 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms