RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ATAD5Q96QE3 1844 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 TCP1P17987 556 aaKnown RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 NOP2P46087 812 aaKnown RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 SYCP3Q8IZU3 236 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 FRMPD4Q14CM0 1322 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 TMCO5BA8MYB1 307 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 TBC1D12O60347 775 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 EIF3JO75822 258 aaKnown RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 ICAM1P05362 532 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 MYCLP12524 364 aaPredicted RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 CYP2C19P33261 490 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 CBWD6Q4V339 395 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 CBWD3Q5JTY5 395 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 CBWD5Q5RIA9 395 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 CCNI2Q6ZMN8 369 aaPredicted RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 CLEC4DQ8WXI8 215 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 PHF20L1A8MW92 1017 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 PSMC2P35998 433 aaKnown RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 FAM83AQ86UY5 434 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 DAW1Q8N136 415 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 BORCS6Q96GS4 357 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 METTL14Q9HCE5 456 aaKnown RBP20.39■□□□□ 0.85
RNF139-201ENST00000303545 PLCB1Q9NQ66 1216 aa20.39■□□□□ 0.85
RNF139-201ENST00000303545 GRID2IPA4D2P6 1211 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 FLOT1O75955 427 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 PAFAH1B1P43034 410 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 GPS2Q13227 327 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 PRAMEF18Q5VWM3 479 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 SAMD7Q7Z3H4 446 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 RNF10Q8N5U6 811 aaKnown RBP20.38■□□□□ 0.85
RNF139-201ENST00000303545 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 TAAR1Q96RJ0 339 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 A0A0U1RQG5 324 aaPredicted RBP20.38■□□□□ 0.85
RNF139-201ENST00000303545 TARSL2A2RTX5 802 aaKnown RBP20.38■□□□□ 0.85
RNF139-201ENST00000303545 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
RNF139-201ENST00000303545 PADI6Q6TGC4 694 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 ZSWIM2Q8NEG5 633 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 SELENOOQ9BVL4 669 aa20.38■□□□□ 0.85
RNF139-201ENST00000303545 LUC7LQ9NQ29 371 aaKnown RBP20.38■□□□□ 0.85
RNF139-201ENST00000303545 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 K7ENM7 598 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 EIF3DO15371 548 aaKnown RBP eCLIP20.37■□□□□ 0.85
RNF139-201ENST00000303545 LRRN2O75325 713 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 ZBTB7AO95365 584 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 LMAN1P49257 510 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 HSD17B4P51659 736 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 MRPS9P82933 396 aaKnown RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 SETQ01105 290 aaPredicted RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 CIAPIN1Q6FI81 312 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 ALKBH5Q6P6C2 394 aaKnown RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 ARHGAP27Q6ZUM4 889 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 MMGT1Q8N4V1 131 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 ZSCAN5CA6NGD5 496 aaPredicted RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 PRLRP16471 622 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 SPP2Q13103 211 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 MTMR2Q13614 643 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 PRPF38AQ8NAV1 312 aaKnown RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 PROCA1Q8NCQ7 364 aaPredicted RBP20.37■□□□□ 0.85
RNF139-201ENST00000303545 NAGPAQ9UK23 515 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 HPCAL4Q9UM19 191 aa20.37■□□□□ 0.85
RNF139-201ENST00000303545 EXOC3O60645 756 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 TUBBP07437 444 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 MAPK7Q13164 816 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 ARHGAP44Q17R89 818 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 TKFCQ3LXA3 575 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 HS2ST1Q7LGA3 356 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 U2AF1L4Q8WU68 220 aaKnown RBP20.36■□□□□ 0.85
RNF139-201ENST00000303545 ZHX2Q9Y6X8 837 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 ESYT3A0FGR9 886 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 SORBS3O60504 671 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 FMO5P49326 533 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 DLG4P78352 724 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 HSP90B2PQ58FF3 399 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 FKBP1CQ5VVH2 108 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 CCDC70Q6NSX1 233 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 B3GNT9Q6UX72 402 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 TXLNBQ8N3L3 684 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 GPRC5CQ9NQ84 441 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 FRMD4BQ9Y2L6 1034 aa20.36■□□□□ 0.85
RNF139-201ENST00000303545 DHX15O43143 795 aaKnown RBP20.35■□□□□ 0.85
RNF139-201ENST00000303545 UGCGQ16739 394 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 MAP9Q49MG5 647 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 MEI1Q5TIA1 1274 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 NSMFQ6X4W1 530 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 ZBED3Q96IU2 234 aaPredicted RBP20.35■□□□□ 0.85
RNF139-201ENST00000303545 PLA2G6O60733 806 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 ATP9AO75110 1047 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 ZNF131P52739 623 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 JAM2P57087 298 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 RPS6P62753 249 aaKnown RBP20.35■□□□□ 0.85
RNF139-201ENST00000303545 SND1Q7KZF4 910 aaKnown RBP eCLIP20.35■□□□□ 0.853e-7■□□□□ 11.2
RNF139-201ENST00000303545 JDP2Q8WYK2 163 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 TEPSINQ96N21 525 aa20.35■□□□□ 0.85
RNF139-201ENST00000303545 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
RNF139-201ENST00000303545 MTMR1Q13613 665 aa20.34■□□□□ 0.85
RNF139-201ENST00000303545 CFAP221Q4G0U5 840 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms