RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FRMD3A2A2Y4 597 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 RSPH10B2B2RC85 870 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 TREHO43280 583 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 TRAK2O60296 914 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 CABYRO75952 493 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 RSPH10BP0C881 870 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 GUCY2CP25092 1073 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 KLRC1P26715 233 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 EHHADHQ08426 723 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 NFRKBQ6P4R8 1299 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 MTHFD1LQ6UB35 978 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 RBM43Q6ZSC3 357 aaKnown RBP10.56□□□□□ -0.72
RFX3-201ENST00000302303 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 ANKLE1Q8NAG6 615 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 WNT8BQ93098 351 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 PYM1Q9BRP8 204 aaKnown RBP10.56□□□□□ -0.72
RFX3-201ENST00000302303 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 CLSTN2Q9H4D0 955 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 GPRC5CQ9NQ84 441 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 COL1A2P08123 1366 aa10.56□□□□□ -0.72
RFX3-201ENST00000302303 KIAA0100Q14667 2235 aaKnown RBP10.55□□□□□ -0.72
RFX3-201ENST00000302303 ARHGEF35A5YM69 484 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 MBD3O95983 291 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 ARL2P36404 184 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 ZNF131P52739 623 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 IGBP1P78318 339 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 CACNB1Q02641 598 aaPredicted RBP10.55□□□□□ -0.72
RFX3-201ENST00000302303 PPFIA1Q13136 1202 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 PNOCQ13519 176 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 SNX17Q15036 470 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 CAMK4Q16566 473 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 DYMQ7RTS9 669 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 GPBP1Q86WP2 473 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 KIAA0319LQ8IZA0 1049 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 REEP2Q9BRK0 252 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 MAGEF1Q9HAY2 307 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
RFX3-201ENST00000302303 PPME1Q9Y570 386 aa10.55□□□□□ -0.72
RFX3-201ENST00000302303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 RRN3P2A6NIE6 340 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 SPDYE4A6NLX3 237 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 KBTBD13C9JR72 458 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 ARVCFO00192 962 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 GTPBP6O43824 516 aaPredicted RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 USO1O60763 962 aaKnown RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 DGAT1O75907 488 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 SSBP05455 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
RFX3-201ENST00000302303 BMP6P22004 513 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 RFC5P40937 340 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 RAD51AP2Q09MP3 1159 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 EMC2Q15006 297 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 POSTNQ15063 836 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 SLC39A5Q6ZMH5 540 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 CEP57L1Q8IYX8 460 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 LRRC71Q8N4P6 559 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 BSNDQ8WZ55 320 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 TMEM143Q96AN5 459 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 PAWRQ96IZ0 340 aaKnown RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 STARD7Q9NQZ5 370 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 TUBE1Q9UJT0 475 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 PCDHA5Q9Y5H7 936 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 PCDHA2Q9Y5H9 948 aa10.54□□□□□ -0.72
RFX3-201ENST00000302303 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
RFX3-201ENST00000302303 C17orf102A2RUQ5 167 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 B4GALT4O60513 344 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 KINO60870 393 aaKnown RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 HIP1RO75146 1068 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CD4P01730 458 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CLCN3P51790 818 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 C1orf53Q5VUE5 145 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 EFCAB12Q6NXP0 572 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 KANK3Q6NY19 840 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 MAEAQ7L5Y9 396 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 C7orf31Q8N865 590 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ASAP3Q8TDY4 903 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 HPS3Q969F9 1004 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 TRPV6Q9H1D0 765 aa10.53□□□□□ -0.72
RFX3-201ENST00000302303 TRMT13Q9NUP7 481 aaKnown RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
RFX3-201ENST00000302303 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms