RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 NBPF20Q3BBV1 942 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 CENPUQ71F23 418 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 UTS2BQ765I0 119 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 ZBED8Q8IZ13 594 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 BHMT2Q9H2M3 363 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 SLC13A4Q9UKG4 626 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 MFAP3LO75121 409 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 MMP1P03956 469 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 CYP2D6P10635 497 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 DDIASQ8IXT1 998 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 ZMYM4Q5VZL5 1548 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 ACTR5Q9H9F9 607 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 STAT3P40763 770 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 SPARCL1Q14515 664 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 GSDMAQ96QA5 445 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 IL1RL2Q9HB29 575 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 CPA2P48052 419 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 TBL3Q12788 808 aaKnown RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 NCAPHQ15003 741 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 TRIM60Q495X7 471 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
ABCA3-201ENST00000301732 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
ABCA3-201ENST00000301732 TNRQ92752 1358 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 APBA3O96018 575 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 MXI1P50539 228 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 SLC27A3Q5K4L6 730 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 C6orf118Q5T5N4 469 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 CAPRIN2Q6IMN6 1127 aaKnown RBP13.21□□□□□ -0.29
ABCA3-201ENST00000301732 ISLR2Q6UXK2 745 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 LRRC37BQ96QE4 947 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 BRAFP15056 766 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 AP1B1Q10567 949 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 GPS1Q13098 491 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.29
ABCA3-201ENST00000301732 HIF1AQ16665 826 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 HEATR4Q86WZ0 1026 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 MAP4K1Q92918 833 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 SERPINI1Q99574 410 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 KLHL8Q9P2G9 620 aaPredicted RBP13.21□□□□□ -0.29
ABCA3-201ENST00000301732 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 PFDN6O15212 129 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 PMS2P54278 862 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 BTN2A2Q8WVV5 523 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.29
ABCA3-201ENST00000301732 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
ABCA3-201ENST00000301732 XPO1O14980 1071 aaKnown RBP13.21□□□□□ -0.3
ABCA3-201ENST00000301732 PPP6R2O75170 966 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 MOCS2O96007 188 aaPredicted RBP13.21□□□□□ -0.3
ABCA3-201ENST00000301732 RBBP7Q16576 425 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 KLF6Q99612 283 aaPredicted RBP13.21□□□□□ -0.3
ABCA3-201ENST00000301732 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 IQANK1A0A1B0GTG1 560 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 UBA6A0AVT1 1052 aaPredicted RBP13.21□□□□□ -0.3
ABCA3-201ENST00000301732 MDM2Q00987 491 aaPredicted RBP13.21□□□□□ -0.3
ABCA3-201ENST00000301732 PLIN5Q00G26 463 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 HACE1Q8IYU2 909 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 FAM81BQ96LP2 452 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 NPHS2Q9NP85 383 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.3
ABCA3-201ENST00000301732 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 FKBP3Q00688 224 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 IMPG1Q17R60 797 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 IFNEQ86WN2 208 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ATP9BO43861 1147 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 CHGBP05060 677 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 LMNB2Q03252 620 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 PDIA2Q13087 525 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 WDR24Q96S15 920 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 CNOT10Q9H9A5 744 aaKnown RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 AMACRQ9UHK6 382 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 HMGB1P1B2RPK0 211 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-201ENST00000301732 HAUS5O94927 633 aa13.2□□□□□ -0.3
ABCA3-201ENST00000301732 PRCPP42785 496 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms