RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 M0R2N6 131 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 LAD1O00515 517 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 UCHL3P15374 230 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 KCNJ1P48048 391 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 GALCP54803 685 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 ZNF449Q6P9G9 518 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 NBPF5PQ86XG9 351 aaPredicted RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 JAMLQ86YT9 394 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 EIF1ADQ8N9N8 165 aaKnown RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 ZNF384Q8TF68 577 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 ARHGEF2Q92974 986 aaKnown RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 AIPL1Q9NZN9 384 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 E9PMD0 336 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 SLC37A4O43826 429 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 NR2F2P24468 414 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 GLYCTKQ8IVS8 523 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 RBM46Q8TBY0 533 aaKnown RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 RIC8AQ9NPQ8 531 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TNNI2P48788 182 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 ICA1Q05084 483 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 ECM1Q16610 540 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 EXOC3L4Q17RC7 722 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 SPATA21Q7Z572 469 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 EXOC3L1Q86VI1 746 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 FBF1Q8TES7 1133 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 RAD54LQ92698 747 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
SNX20-201ENST00000300590 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 BNIP1Q12981 228 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 KRT25Q7Z3Z0 450 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 VPS36Q86VN1 386 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 SLC35G2Q8TBE7 412 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 PGM2Q96G03 612 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 GANQ9H2C0 597 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 C6orf50Q9HD87 102 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 HOMER3Q9NSC5 361 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 AJAP1Q9UKB5 411 aaPredicted RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX20-201ENST00000300590 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 TARSP26639 723 aaKnown RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 PRDX5P30044 214 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 RPL21P46778 160 aaKnown RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 RAB27AP51159 221 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 AUHQ13825 339 aaKnown RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 DUPD1Q68J44 220 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 ANO7Q6IWH7 933 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 TMEM154Q6P9G4 183 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 TAOK1Q7L7X3 1001 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
SNX20-201ENST00000300590 COA7Q96BR5 231 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 SH3GLB2Q9NR46 395 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 ZDHHC18Q9NUE0 388 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 TFCP2L1Q9NZI6 479 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 KLHL14Q9P2G3 628 aa11.87□□□□□ -0.51
SNX20-201ENST00000300590 CETN3O15182 167 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 LUC7L3O95232 432 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 AGTP01019 485 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 STX2P32856 288 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 KLRC3Q07444 240 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 DCAF12L1Q5VU92 463 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 LMNTD2Q8IXW0 634 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 MTRF1LQ9UGC7 380 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 DDX3XO00571 662 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNX20-201ENST00000300590 ALADP13716 330 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 RANBP1P43487 201 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ZNF131P52739 623 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 MECOMQ03112 1051 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 CCDC105Q8IYK2 499 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ZNF444Q8N0Y2 327 aaPredicted RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 PIGBQ92521 554 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 TGS1Q96RS0 853 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms