RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
GABRB3-201ENST00000299267 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
GABRB3-201ENST00000299267 FAM167AQ96KS9 214 aa11.05□□□□□ -0.64
GABRB3-201ENST00000299267 RUSC1Q9BVN2 902 aa11.05□□□□□ -0.64
GABRB3-201ENST00000299267 ASCC2Q9H1I8 757 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-201ENST00000299267 HAUS4Q9H6D7 363 aa11.05□□□□□ -0.64
GABRB3-201ENST00000299267 TOPAZ1Q8N9V7 1692 aa11.05□□□□□ -0.64
GABRB3-201ENST00000299267 LRRC53A6NM62 1247 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 PDHXO00330 501 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 WNT7AO00755 349 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 CAPN9O14815 690 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ATRNO75882 1429 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ORC2Q13416 577 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 PPP2R5DQ14738 602 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 CCDC105Q8IYK2 499 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 IPO4Q8TEX9 1081 aaKnown RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ASIC3Q9UHC3 531 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 NDUFA10O95299 355 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 TCF7P36402 384 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 TUFT1Q9NNX1 390 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 SUCLA2Q9P2R7 463 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 MFAP3LO75121 409 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 KIF4AO95239 1232 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 MOCS3O95396 460 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 TUBB4AP04350 444 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 SREBF1P36956 1147 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 CALCOCO2Q13137 446 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 TOGARAM2Q6ZUX3 1019 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 CHST13Q8NET6 341 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 NEK9Q8TD19 979 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ZNF653Q96CK0 615 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 PAIP2Q9BPZ3 127 aaKnown RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 RASAL2Q9UJF2 1139 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
GABRB3-201ENST00000299267 EMSYQ7Z589 1322 aa11.04□□□□□ -0.64
GABRB3-201ENST00000299267 ZMYND10O75800 440 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 SLC25A27O95847 323 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ACTN1P12814 892 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 KIF11P52732 1056 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 BMS1Q14692 1282 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 INTS8Q75QN2 995 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TCP11Q8WWU5 503 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ZNF142P52746 1687 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 A0A087X0B3 334 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TBX3O15119 743 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 CD44P16070 742 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 DSG3P32926 999 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 COPB2P35606 906 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 VAMP7P51809 220 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 GTF2A2P52657 109 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 LONRF2Q1L5Z9 754 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ZNF365Q70YC5 407 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 DAGLBQ8NCG7 672 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 SLC17A8Q8NDX2 589 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TRIM58Q8NG06 486 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 MYO1FO00160 1098 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ZEB2O60315 1214 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 HSF2BPO75031 334 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 CYP11B2P19099 503 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 RIT2Q99578 217 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 IKBKGQ9Y6K9 419 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 LRP6O75581 1613 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 DGAT1O75907 488 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 FERP16591 822 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 PHKA2P46019 1235 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 FKBP1CQ5VVH2 108 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TMEM270Q6UE05 265 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 OR6B3Q8NGW1 331 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 UBLCP1Q8WVY7 318 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
GABRB3-201ENST00000299267 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 AGO2Q9UKV8 859 aaKnown RBP11.03□□□□□ -0.64
GABRB3-201ENST00000299267 USP27XA6NNY8 438 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 RHOBTB3O94955 611 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 FKBP1AP62942 108 aaKnown RBP11.02□□□□□ -0.64
GABRB3-201ENST00000299267 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 RINT1Q6NUQ1 792 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 OTUD6BQ8N6M0 293 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 MRIQ9BWK5 157 aa11.02□□□□□ -0.64
GABRB3-201ENST00000299267 A1CFQ9NQ94 594 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms